Query= MSMg01no205_i23.b1 MSMg01no205_i23.b1 CHROMAT_FILE:
MSMg01no205_i23.b1 PHD_FILE: MSMg01no205_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:27 2005
(244 letters)
>mm_chr3_45322817_45323459
Length = 643
Score = 350 bits (181), Expect = e-101
Identities = 193/197 (97%), Gaps = 1/197 (0%)
Strand = Plus / Minus
Query: 1 tatttgaagtgtagccacatttttcagtataaaaaaaaatctaaaaatcacttaatacat 60
||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 373 tatttaaagtgtagccacatttttcagt-ttaaaaaaaatctaaaaatcacttaatacat 315
Query: 61 gactaaatattatgcacaaaactagttttatatgaaagaatttcttgtagggctgctagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gactaaatattatgcacaaaactagttttatatgaaagaatttcttgtagggctgctagc 255
Query: 121 agcatttatagatccatgctcttttaatcccctagagacagtatgagtacatagtatata 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agcatttatagatccatgctgttttaatcccctagagacagtatgagtacatagtatata 195
Query: 181 tatatatatatatatat 197
|||||||||||||||||
Sbjct: 194 tatatatatatatatat 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no205_i23.g1 MSMg01no205_i23.g1 CHROMAT_FILE:
MSMg01no205_i23.g1 PHD_FILE: MSMg01no205_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:28 2005
(317 letters)
>mm_chr3_45188858_45189574
Length = 717
Score = 605 bits (313), Expect = e-178
Identities = 316/317 (99%)
Strand = Plus / Plus
Query: 1 atgtgtgctctatctgtggctgcttagtcttgggaaacccacgcaggaggaaagggaaaa 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 atgtgtgctctatctgtggctgcttagtcttgggaaacccaggcaggaggaaagggaaaa 260
Query: 61 agaggctgctcaagggtctctttatattgctgcaagtcattaatatgcagacctaatgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaggctgctcaagggtctctttatattgctgcaagtcattaatatgcagacctaatgag 320
Query: 121 acttgagaactgccaagaatccccggaggtccctgccccttgcgggccttcacgctaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttgagaactgccaagaatccccggaggtccctgccccttgcgggccttcacgctaagt 380
Query: 181 gaacagagcatctatttagtgtctggggtcctgacaacaaaccagatcttgccagcagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacagagcatctatttagtgtctggggtcctgacaacaaaccagatcttgccagcagtt 440
Query: 241 tatatgtgagtacaaagtccctttcatgtttgccctatatgtggtatatgatttattgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatgtgagtacaaagtccctttcatgtttgccctatatgtggtatatgatttattgtt 500
Query: 301 atcattttaaaactgta 317
|||||||||||||||||
Sbjct: 501 atcattttaaaactgta 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
