Query= MSMg01no208_l15.b1 MSMg01no208_l15.b1 CHROMAT_FILE:
MSMg01no208_l15.b1 PHD_FILE: MSMg01no208_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:38 2005
(665 letters)
>mm_chr3_17179087_17180151
Length = 1065
Score = 601 bits (311), Expect = e-176
Identities = 332/339 (97%), Gaps = 1/339 (0%)
Strand = Plus / Minus
Query: 6 aattcattttgaaacaatcctggagatgtcccactatttcctgacttttcagaggatagc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aattcattttgaaacaatcctggagatgtcccactatttcctgacttttcagaggatagc 285
Query: 66 agtaaaaacataatgtcttcatatgtttgaggtgatatttttcaagaagaaaatgatctc 125
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 284 agtaaaaacataatgtcttcatatttttgaggtgatatttttcaaggagaaaatgatctc 225
Query: 126 tttgttactagttcatttttatttttattagatattttcttcatttacatttcaaatgct 185
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tttgttactagttca-ttttatttttattagatattttcttcatttacatttcaaatgct 166
Query: 186 atcccgaaagtcccttataacctccactgccctgctccccaacccacctactcctgcttc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atcccgaaagtcccttataacctccactgccctgctccccaacccacctactcctgcttc 106
Query: 246 ctggccctggcattcccctgtactggggcacataatcttcacaagacaaagggcctctcc 305
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 105 ctggccctggcattcccctgtactggggcacataatcttcacaagaccaagggcctctcc 46
Query: 306 tctcaatgatggtcaactaggccatcttttgctacatat 344
|| ||||||||| ||||||||||||||||||||| ||||
Sbjct: 45 tcccaatgatggccaactaggccatcttttgctatatat 7
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no208_l15.g1 MSMg01no208_l15.g1 CHROMAT_FILE:
MSMg01no208_l15.g1 PHD_FILE: MSMg01no208_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:38 2005
(287 letters)
>mm_chr3_17077513_17078199
Length = 687
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%)
Strand = Plus / Plus
Query: 1 tctcagctcgttgttgagctgaataatttttatatttcaaaatttagttccacatctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcagctcgttgttgagctgaataatttttatatttcaaaatttagttccacatctctg 260
Query: 61 ggaggaagaagctaattcttcacatctattgaagttccctgttgtgtgataagatgtttc 120
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 261 ggaggaagaagctaattcttcacatctattgaagttctctgttgtgtgacaagatgtttc 320
Query: 121 ctgggagacacaacacatgtatgtctaaagtatggatgtcatcaaagtacaacttggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgggagacacaacacatgtatgtctaaagtatggatgtcatcaaagtacaacttggaga 380
Query: 181 acccatgagttgtatagggactacttgtagaaatatgtaggggaggttacatacagaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acccatgagttgtatagggactacttgtagaaatatgtaggggaggttacatacagaagc 440
Query: 241 agaaattactcaaaaacagctgcagcaccaaatctctggcccaa 284
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 agaaattactcaaaaacagctgcatcaccaaatctctggcccaa 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
