Query= MSMg01no209_g11.b1 MSMg01no209_g11.b1 CHROMAT_FILE:
MSMg01no209_g11.b1 PHD_FILE: MSMg01no209_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:31 2005
(312 letters)
>mm_chr3_101986537_101987246
Length = 710
Score = 540 bits (279), Expect = e-158
Identities = 298/305 (97%), Gaps = 2/305 (0%)
Strand = Plus / Minus
Query: 7 gaattcagtattcaaaactttaatgccatttttaaaaatggtgtatcaagtttaccctgg 66
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaattcagtatttaaaactttaatgccatttttaaaaatggtgtatcaagtttaccctgg 288
Query: 67 tacctcagtggcattgttagctcttcctttttgtttccactctcagagacagcctgtttg 126
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 287 tacctcagtgggattgttagctcttcctttttgtttccactctc--agacagcctgtttg 230
Query: 127 gtcagtcaattatgtagtcaccctagtgactaataaagagttgggctccagccaatgttg 186
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 229 gtcagtcaattatgtagtcaccctagtgactaataaagagtcgggctccagccaatgttg 170
Query: 187 atgactcatacctttaatcccagcatcactaggctgagacaggcgaatgtctgtgagttc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 atgactcatacctttaatcccagcatcactaggctgagacaggcgaatgtctgtgagttc 110
Query: 247 aaggccagcctgtctacagcataaattatattccagcaagggttacacagagaaaccctg 306
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 109 aaggccagcctgtctacagcataaattacagtccagcaagggttacacagagaaaccctg 50
Query: 307 tctca 311
|||||
Sbjct: 49 tctca 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 710
Length adjustment: 9
Effective length of query: 303
Effective length of database: 701
Effective search space: 212403
Effective search space used: 212403
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no209_g11.g1 MSMg01no209_g11.g1 CHROMAT_FILE:
MSMg01no209_g11.g1 PHD_FILE: MSMg01no209_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:31 2005
(280 letters)
>mm_chr3_101857132_101857811
Length = 680
Score = 511 bits (264), Expect = e-149
Identities = 276/280 (98%)
Strand = Plus / Plus
Query: 1 caattcctactttgcttagggacaaaagagagactcggagtgggcaaatgaattcagctc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caattcttactttgcttagggacaaaagagagactcggagtgggcaaatgaattcagctc 260
Query: 61 tattattatgctggggatcaaatccctgtggaccagcagggcgtggctttcattctgggc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattattatgctggggatcaaacccctgtggaccagcagggcgtggctttcattctgggc 320
Query: 121 ctacaccgacctgggtacctggggaataagagcgcattttaaaattagcccatgcaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacaccgacctgggtacctggggaataagagcgcattttaaaattagcccatgcaaaaa 380
Query: 181 taaataacgaggaaagaaaatgctgtgttcaaaatcaaaagcaactggcaatgtcattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaataacgaggaaagaaaatgctgtgttcaaaatcaaaagcaactggcaatgtcattta 440
Query: 241 gtgttaaagcttaacctgttcaaggccctgggcttgcttc 280
||| |||||||||||||| |||||||||||||||||||||
Sbjct: 441 gtggtaaagcttaacctgctcaaggccctgggcttgcttc 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
