Query= MSMg01no213_n02.b1 MSMg01no213_n02.b1 CHROMAT_FILE:
MSMg01no213_n02.b1 PHD_FILE: MSMg01no213_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:57 2005
(272 letters)
>mm_chr3_65862967_65863638
Length = 672
Score = 513 bits (265), Expect = e-150
Identities = 268/269 (99%)
Strand = Plus / Minus
Query: 4 ggaattctcttttctctatcagtgtactgtttcaatttctgtggtacagactgacctcaa 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggaattctcttttctccatcagtgtactgtttcaatttctgtggtacagactgacctcaa 270
Query: 64 cacaatttattatcaacacatacttaatataaaccaaattaggctaatagagtgtatagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cacaatttattatcaacacatacttaatataaaccaaattaggctaatagagtgtatagt 210
Query: 124 gaagatgtcctcaaattttgtcctgtgtaacccctaaaagaatttttgaaggaaaaaaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaagatgtcctcaaattttgtcctgtgtaacccctaaaagaatttttgaaggaaaaaaat 150
Query: 184 ctatgtaacatcttaaatttcatcaacacatctagcatgagtttgcacagttgtaattta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ctatgtaacatcttaaatttcatcaacacatctagcatgagtttgcacagttgtaattta 90
Query: 244 tgttacactataaatattggcatttcaaa 272
|||||||||||||||||||||||||||||
Sbjct: 89 tgttacactataaatattggcatttcaaa 61
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no213_n02.g1 MSMg01no213_n02.g1 CHROMAT_FILE:
MSMg01no213_n02.g1 PHD_FILE: MSMg01no213_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:57 2005
(195 letters)
>mm_chr3_65702783_65703376
Length = 594
Score = 346 bits (179), Expect = e-100
Identities = 191/195 (97%), Gaps = 1/195 (0%)
Strand = Plus / Plus
Query: 1 ttatcacattgctgcatgcaatggcagaagattgggaacagtctaaaggcctgtcagtta 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ttatcacattgctgcatgcaatggcagaagattgggaacagtctaaacgcctgtcagtta 260
Query: 61 ggactaattaaataattcatggtcactgcatagagtggcatacagaagcattctccacgc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 261 ggactaattaaataattcatggtcactgcatagagtggcatacagaagcattctccgccc 320
Query: 121 agcacatgttgctatctcaaacaaatacacttaggtttgggatttatgtattatcatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcacatgttgctatctcaaacaaatacacttaggtttgggatttatgtattatcatttt 380
Query: 181 ttttaataaaaggtt 195
||| |||||||||||
Sbjct: 381 ttt-aataaaaggtt 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 594
Length adjustment: 8
Effective length of query: 187
Effective length of database: 586
Effective search space: 109582
Effective search space used: 109582
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
