Query= MSMg01no214_a22.b1 MSMg01no214_a22.b1 CHROMAT_FILE:
MSMg01no214_a22.b1 PHD_FILE: MSMg01no214_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:15 2005
(324 letters)
>mm_chr3_55448228_55448952
Length = 725
Score = 578 bits (299), Expect = e-169
Identities = 314/319 (98%), Gaps = 1/319 (0%)
Strand = Plus / Plus
Query: 5 gaattcttaaacaggaagtgcagatgtggaaggtcgctgccaccaggccctgaagccaac 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattcttaaacaggaagtgcagatgtggaaggtcgctgccaccaggccctgaagctaac 264
Query: 65 taaatcacagcagtgctatgtgtaggtatctactgaagctaggaaataattacctagtta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaatcacagcagtgctatgtgtaggtatctactgaagctaggaaataattacctagtta 324
Query: 125 aggtaagcagtaagagggaactgatatttagaaacattgttaaggggagagcaaaccaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggtaagcagtaagagggaactgatatttagaaacattgttaaggggagagcaaaccaaa 384
Query: 185 ggtgctggactgctggaaagctgttgaaaacccgccgacctgtggctggtcacagagaac 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 ggtgctggactgctggaaagctgttgaaaacccgccgacctgtgcctggtcacagagaac 444
Query: 245 acagccgacc-gtgcctggtcactcagaacacagccagcctggtgtctggacaccaagag 303
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagccgacctgtgcctggtcactcagaacacagccagcctggtgtctggacaccaagag 504
Query: 304 cattgccgactgtccccca 322
|| |||||||||||||||
Sbjct: 505 cagagccgactgtccccca 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 725
Length adjustment: 9
Effective length of query: 315
Effective length of database: 716
Effective search space: 225540
Effective search space used: 225540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_a22.g1 MSMg01no214_a22.g1 CHROMAT_FILE:
MSMg01no214_a22.g1 PHD_FILE: MSMg01no214_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:16 2005
(291 letters)
>mm_chr3_55586768_55587458
Length = 691
Score = 553 bits (286), Expect = e-162
Identities = 289/290 (99%)
Strand = Plus / Minus
Query: 1 cacccagagggacatgctcctcttgcgcccatcgctcagtttcagctccgcacagccagg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 490 cacccagagggacatgctcctcttgcgcccatcgctcagtttcagcaccgcacagccagg 431
Query: 61 cagggagccgtcgtccacgaagttaaacacccccatctggttcagatagagtaccacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cagggagccgtcgtccacgaagttaaacacccccatctggttcagatagagtaccacctc 371
Query: 121 gaactcggtgggagagataacctccaggccctcgtagcggttgtccatctcattgaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaactcggtgggagagataacctccaggccctcgtagcggttgtccatctcattgaggga 311
Query: 181 gctgatgaaacgcggttcctgcacttcaacctccttcaggacgtcggagaccactttgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gctgatgaaacgcggttcctgcacttcaacctccttcaggacgtcggagaccactttgca 251
Query: 241 gacttcccggatggttttggcgatggcagctttcctggcctggcatttct 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gacttcccggatggttttggcgatggcagctttcctggcctggcatttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
