CCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGGTATGGATC
CGCGGAATTCATGTGTTACTATAATAAGGAGGTAATGTAAGACTGACAAA
ATGGAAATTACATATTTTCTGTAAACAACACATGACGGGTATGTACATGA
GGCCCCAGGGAGTTTAGATGTCAGGTGGGGTTGGGGTGGGATGTACNNAC
TNNTCGTGNANATGGTNATGGTGAGGAGTGGTTTGTTTTGTAGGGTTTTT
TTTAAGAAGGAGGGAATAAGGAATAAATACCAGAATTTTAGAGCGAGAAA
AAGGAAGGTTTTAGATGAATTTACAGACCCCCCCCCCCCACCCAAACAAA
TTTTTTTTTTTCCCCCCCCCCCCCCCCCCCACGTCCGACTTTTGCGCATT
TTTCTTTTTTCCCTTCCCCAAAAAAAAAAAAAAAATTTCTTTTCGGGTCT
CCTCCCCTTTTCCCCCCTCCCCCTTATTCCCTTTTCGTTCCCTTTCCTCT
CCCCTTTTTCTCCTCTCTTTCTCCCCCCCCTTTTTTTTTCCTTCACCCCT
CCCTTTCTCTTACCCTCTCCTTTTTCCTCCCTTTTTTTTACTTCCTTTAT
TCTTCCTCTCCTCCTTTTTTTTTCACCACTTCTCACCCCCTACTTTTTTC
CCCTCCACCCCACCCTATTCTTCTCCTTTTTTTTTTTTTTTTCTCCACCC
CCGCCTTTTTTTCTCCCCCCTCCCCCTTTTTTTTTATTTTTTTTTTCTTC
ACCCCCCTCTTTTCTTTGT

TCGATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATGAGTGTAACAGTCCTGTCATGTC
CAGAAGACACACAGCAATTTCTTAGTATTTCCTCCTTACAAATTCAACTT
TGCTTGAGCTACAAATATCTGGTAACCACTCTCCTATTTTTTGCCATGGA
ATTTTGCACAGTGTTCAGAAAAAAATCTAAATGAAATTGTGCCATATACA
ACATTCTATTACTGACTTTTTTGGATAAGACTTATAAGGTCTTCAGACTC
ATAGTATTTGAGTGCATCAATACTATAATCTTTTTCTTCGTTTTTTATTG
GATATTTTATTTATTTACATCTAAAATGTTATTCCCTTTCCCAGTTTCTC
CTCTGAACACCCCCTATCCCATCTTCCTTCCCCCTGCTTTTATGAGGGTG
CTCCTCCACCAAAACCCCCACTTCCACCTCCCTCCCCTGGCATTCCCCTA
TACTGGGATATCGAGCCTTCTCAGGACCAATGGCCTCTCATCCCATTGAT
GCCAGAGAAAGCCATCCTCTGCTACATATGCGGCTGGAGCCATAGGTCCC
TCCATGTATACTCTTCGGTTGGTGATTTAGTCCCTGGGTGCTCTGGGAGG
TCTGGTTGGTTGATATTGTTGTTCTTCCTATGGGGTTGTAAACCCCTTCA
GCTCCTN

Query= MSMg01no215_c12.g1 MSMg01no215_c12.g1 CHROMAT_FILE:
MSMg01no215_c12.g1 PHD_FILE: MSMg01no215_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:44 2005
         (632 letters)



>mm_chr3_113812542_113813573
          Length = 1032

 Score = 1116 bits (577), Expect = 0.0
 Identities = 620/637 (97%), Gaps = 7/637 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtgtaacagtcctgtcatgtccagaagacacacagcaatttcttagtatttcctcc 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgagtgcaacagtcctgtcatgtccagaagacacacagcaatttcttagtatttcctcc 260

                                                                       
Query: 61  ttacaaattcaactttgcttgagctacaaatatctggtaaccactctcctattttttgcc 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 261 ttacaaattcaactttgcttgagctacaaatatctgctaaccactctcctattctttgcc 320

                                                                       
Query: 121 atggaattttgcacagtgttcagaaaaaaatctaaatgaaattgtgccatatacaacatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggaattttgcacagtgttcagaaaaaaatctaaatgaaattgtgccatatacaacatt 380

                                                                       
Query: 181 ctattactgacttttttggataagacttataaggtcttcagactcatagtatttgagtgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctattactgacttttttggataagacttataaggtcttcagactcatagtatttgagtgc 440

                                                                       
Query: 241 atcaatactataatctttttcttcgttttttattggatattttatttatttacatctaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 atcaatactataatctttttcttcgttttttattggatattttatttatttacatttaaa 500

                                                                       
Query: 301 atgttattccctttcccagtttctcctctgaacaccccctatcccatcttcct-t----- 354
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |     
Sbjct: 501 atgttattccctttcccagtttctcctctgaacaccccctatcccatct-cctctgaaca 559

                                                                       
Query: 355 ccccctgcttttatgagggtgctcctccaccaaaacccccacttccacctccctcccctg 414
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 560 ccccctgcttttatgagggtgctcctccacccaaacccccacttccacctccctcccctg 619

                                                                       
Query: 415 gcattcccctatactgggatatcgagccttctcaggaccaatggcctctcatcccattga 474
           ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 620 gcattcccctatactgggatatcgagccttctcaggatcaatggcctctcttcccattga 679

                                                                       
Query: 475 tgccagagaaagccatcctctgctacatatgcggctggagccataggtccctccatgtat 534
           ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 680 tgccagataaagccatcctctgcaacatatgcggctggagccataggtccctccatgtgt 739

                                                                       
Query: 535 actcttcggttggtgatttagtccctgggtgctctgggaggtctggttggttgatattgt 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 actcttcggttggtgatttagtccctgggtgctctgggaggtctggttggttgatattgt 799

                                                
Query: 595 tgttcttcctatggggttgtaaaccccttcagctcct 631
           |||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgttcttcctatggggttgtaaaccccttcagctcct 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space:   635684
Effective search space used:   635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)