CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATTCACTTTACTTTTACAGGTATGTTTCTTTTTAATACATGGTTTTC
AAAGTCTAGCTTTTTCCATTCACCAATTAAAATTTGATAATATCTGCCAG
TAACAATAAAATCATTAATATGCCTGGATTAGGTTTCAGTTAAAATTTTT
TATGAATAGATGAGAATAAGTCTGGAAGTTCATTATAGAAGAACATGTTC
CTGAATAGATTTCAATAAGTAAATCCATAAGGAATTATGTAATATAAATT
TACTATGTTTTATTTGCTTCATATATTATAATGAACTTTTAAAGATATTG
ATGTTTGGAACTGGAGAGTTGGCTCAGCAATTAAGAACATTGGCTGCTAT
TCTGGAGTACCCAGACCACATACCCATACTGCACACTGTGACTCACACCT
ACCTGCAAGTTCAGTTCTTGGGAACCAAACATCCTCTTTTGGCCAAAGTT
GGCAACAGGTATACAAGTGGTGCACAGATATTTGTAGGCAAAACACCCAT
ACAGGTAAAATCAAAATTAAATCTAAACAAAATAATACAATGAAAAAGAA
TTTTGGTTACATAAGGAGAAGTGAAAGAATCATAAATCTTTATTTCACTT
ATTTTTCCATTCAGAAAACTAAGAGAAATCTAAGAATTAAAAATAATTAT
CTGAAGCTGGGGAATGGAGATTTACACCTTTAAAC

CCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTATCATAAAAAGATAGTAGCTT
TCTAAATGTTTTTTCATGTTCAACCAGATGATTATATTCATTTTATTCTT
CATTCATTTCTTAACAGGATAAATAGATAACATTACATGATTTTCATATT
CTGCATTATCCTTCCATCCTTGGAATAAATCCTGTATGAGCATGGTGAAG
AATTATTTTAATAAACCATTGAGGTTGCTTGGCTAGTGTTGCTCATGTAT
CCCACCCCTGAGCGTTCTTATACCCATATTTATAAAGGACATTAACAAAT
AATCCTTTGCTTTTGATGTGTTGCTCTTTGCAATTACTATTGGGGTAATG
TTGGTTTCATAACAGGTGCCCCCAAGTTTACTTATTCATCAAATTTTTGG
ACAAATTTGAGAAAAATTAATAGTAACCCAAAATATTTTCTTGGTCTTCA
TGAAATCAGAAAATTCTGAATACGTTTGTAGAGACTTTTTTTGAGATAAA
ACTATAATTACATCATTTCACTCTTTCCTTTCCTTCCCCCATCTCCCCTT
TATTCCCTTACTGTTCTCTTTCAAATTCATGGCCTCCTTTTTCATTAATT
GTTATGGNATTCATGTATGTATATAACTGTATATTTTAAGTATAACCAGC
CTAGTCTATATAATGTTATATGTATGGACATTTGC

Query= MSMg01no215_m14.b1 MSMg01no215_m14.b1 CHROMAT_FILE:
MSMg01no215_m14.b1 PHD_FILE: MSMg01no215_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:32 2005
         (593 letters)



>mm_chr3_125452149_125453141
          Length = 993

 Score =  866 bits (448), Expect = 0.0
 Identities = 478/488 (97%), Gaps = 1/488 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggtatgtttctttttaatacatggttttcaaagtctagctttttccattcaccaatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 487 caggtatgtttctttttaatacatggttttcaaagtctagctttttccattcaacaatta 428

                                                                       
Query: 61  aaatttgataatatctgccagtaacaataaaatcattaatatgcctggattaggtttcag 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 427 aaatttgataatatctgccagtaataataaaatcattaatatgcctggattaggtttcag 368

                                                                       
Query: 121 ttaaaattttttatgaatagatgagaataagtctggaagttcattatagaagaacatgtt 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttaaaattttgtatgaatagatgagaataagtctggaagttcattatagaagaacatgtt 308

                                                                       
Query: 181 cctgaatagatttcaataagtaaatccataaggaattatgtaatataaatttactatgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 307 cctgaatagatttcaataagtaaatccataaggaattatgtaatataaatttactctgtt 248

                                                                       
Query: 241 ttatttgcttcatatattataatgaacttttaaagatattgatgtttggaactggagagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttatttgcttcatatattataatgaacttttaaagatattgatgtttggaactggagagt 188

                                                                       
Query: 301 tggctcagcaattaagaacattggctgctattctggagtacccagaccacatacccatac 360
           ||||||||||||||||||||||||||||||||||||| ||||||||  | |||||||| |
Sbjct: 187 tggctcagcaattaagaacattggctgctattctggaatacccagagtagatacccat-c 129

                                                                       
Query: 361 tgcacactgtgactcacacctacctgcaagttcagttcttgggaaccaaacatcctcttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tgcacactgtgactcacacctacctgcaagttcagttcttgggaaccaaacatcctcttt 69

                                                                       
Query: 421 tggccaaagttggcaacaggtatacaagtggtgcacagatatttgtaggcaaaacaccca 480
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  tggccaaagttggcaagaggtatacaagtggtgcacagatatttgtaggcaaaacaccca 9

                   
Query: 481 tacaggta 488
           ||||||||
Sbjct: 8   tacaggta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)