Query= MSMg01no216_a14.b1 MSMg01no216_a14.b1 CHROMAT_FILE:
MSMg01no216_a14.b1 PHD_FILE: MSMg01no216_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:51 2005
(316 letters)
>mm_chr3_92998145_92998860
Length = 716
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%)
Strand = Plus / Plus
Query: 4 ggaattcagtagaattgaagttcagactttcacatgtgcagttagagtttgcattaatag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtagaattgaagttcagactttcacatgtgcagttagagtttgcattaatag 263
Query: 64 tctaaggtgagcatgctgtggtcagtaacaaatgagcttcaccaaatggctattgaaaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctaaggtgagcatgctgtggtcagtaacaaatgagcttcaccaaatggctattgaaaac 323
Query: 124 ccagaaaaggatggatgtgggtagataagcagagagtaatgagaaaatggggagaaagga 183
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 324 ccagaaaaggatggatgtgggtagataagcagagaataatgagaaaatggggagaaagga 383
Query: 184 ggcctgggtacggaggaacagcatacctgagactgcccttgcttggtgcccaaggactct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggcctgggtacggaggaacagcatacctgagactgcccttgcttggtgcccaaggactct 443
Query: 244 gcttccttggactataacctttttgaagtaaggtaagcaaaagtctctagagagagtatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcttccttggactataacctttttgaagtaaggtaagcaaaagtctctagagagagtatc 503
Query: 304 atggcagtcttta 316
|||||||||||||
Sbjct: 504 atggcagtcttta 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no216_a14.g1 MSMg01no216_a14.g1 CHROMAT_FILE:
MSMg01no216_a14.g1 PHD_FILE: MSMg01no216_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:51 2005
(345 letters)
>mm_chr3_93149685_93150429
Length = 745
Score = 601 bits (311), Expect = e-176
Identities = 335/345 (97%), Gaps = 5/345 (1%)
Strand = Plus / Minus
Query: 1 caggacagctagggctatacagagaaaccctgtctcaaagaaccaaaaacccaaaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 443 caggacagctagggctatacagagaaaccctgtctcaaagaaccaaaaa---aaaaaaa- 388
Query: 61 ccaccaaaaaaaaaatctatattttagaaaaagatggattttttagtagtataagtatta 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 387 -aaccaaaaaaaaaatctatattttagaaaaaggtggattttttagtagtataagtatta 329
Query: 121 actttttgggatacaattacatggtattttagatggcatgtgtataaacacacatgcttt 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acttttttggatacaattacatggtattttagatggcatgtgtataaacacacatgcttt 269
Query: 181 agatagtgtcttagtcagggtttctattcctgcacaaacagtcattaccaagaatcaagt 240
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 268 agatagtgtcttagtcagggtttctattcctgcacaaacagtcatgaccaagaagcaagt 209
Query: 241 tggggaggaaagggtttatttggcttacacttccatactgctgttcatcaccaaggaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tggggaggaaagggtttatttggcttacacttccatactgctgttcatcaccaaggaagt 149
Query: 301 caggactggaactcaagcaggtcaggaagcaggagctgatgcaga 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 caggactggaactcaagcaggtcaggaagcaggagctgatgcaga 104
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
