Query= MSMg01no217_g14.b1 MSMg01no217_g14.b1 CHROMAT_FILE:
MSMg01no217_g14.b1 PHD_FILE: MSMg01no217_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:56 2005
(413 letters)
>mm_chr3_126008436_126009248
Length = 813
Score = 514 bits (266), Expect = e-150
Identities = 351/404 (86%), Gaps = 40/404 (9%)
Strand = Plus / Plus
Query: 5 gaattcagatttgccacctaaaattattagtcttctaagatagagaagataaattttaca 64
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaatccagatttcccacctaaaattattagtcttctaagatagagaagataaattttaca 264
Query: 65 atgcagataccaagagaattcttatagttctcctaaatagtttctttctctgtctctctc 124
|| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 attcagataccaagagaatttttatagttctcctaaatagtttctttctctctctctctc 324
Query: 125 cctccctctgtctctctccctctccctcccgatgtgctttcctcctccctctccctccat 184
|||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| |||
Sbjct: 325 cctccctctgtctctccccctctccctcccgatgttctttccccctccctctcccttcat 384
Query: 185 ctccctctgtctgcctgcctgtctgcctgtctgtctctatctatctatctatctatctat 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttccctctgtctgcctgcctgtctgcctgtctgtctctatctatctatctatctatctat 444
Query: 245 ctatctatctatctatctatctatctatctatctatctatctctatctgataatcccttg 304
|||||||||| ||||||||||||||||||
Sbjct: 445 ctatctatct--------------------------------ctatctgataatcccttg 472
Query: 305 cctcaactttcccagtgatggaattatagatgtgtttgaccatgtaaggttcaattttt- 363
||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cctcaacttccccaatgatggaattatagatgtgtttgaccatgtaaggttcaat----a 528
Query: 364 ---gcttcttgaagctaagtgattcaacttttcaaaaatctttt 404
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 529 caagcttcttgaaactaagtgattcaacttttcaaaaatctttt 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_g14.g1 MSMg01no217_g14.g1 CHROMAT_FILE:
MSMg01no217_g14.g1 PHD_FILE: MSMg01no217_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:56 2005
(236 letters)
>mm_chr3_126071406_126072040
Length = 635
Score = 408 bits (211), Expect = e-118
Identities = 229/241 (95%), Gaps = 11/241 (4%)
Strand = Plus / Minus
Query: 1 atgatgatatggtataggtaagactatcttaaataaacacaggaaggcaaagaacataat 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 435 atgatgatatggtataggtaagactatcttaaataagcacaggaaggcaaagaacataat 376
Query: 61 ttgaatggcaataaagttaaaaccaagtcattaaaaaaacacattagtgtaagagttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttgaatggcaataaagttaaaaccaagtcattaaaaaaacacattagtgtaagagttgaa 316
Query: 121 aagaagtgaaggatttgtgcaatacagacatctgacaaaggaagagattatataattatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aagaagtgaaggatttgtgcaatacagacatctgacaaaggaagagattatataattatc 256
Query: 181 acactccatc-----ttttttaaaatagtcacctaaatagaaagtaggatgactgtttac 235
|||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acactccatcaaaaa------aaaatagtcacctaaatagaaagtaggatgactgtttac 202
Query: 236 a 236
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 635
Length adjustment: 9
Effective length of query: 227
Effective length of database: 626
Effective search space: 142102
Effective search space used: 142102
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
