Query= MSMg01no231_d07.b1 MSMg01no231_d07.b1 CHROMAT_FILE:
MSMg01no231_d07.b1 PHD_FILE: MSMg01no231_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:26 2005
(318 letters)
>mm_chr3_26141090_26141808
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 5 gaattcacatcttgcctggaatatatgaagccttgttttaatttttttaaatgtatttgt 64
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 519 gaattcacatcttgcctggaatatatgaagccttgtttcaattttttaaaatgtatttgt 460
Query: 65 tgtgtgtatcatgcctgacatggcatacaagaatctaactagatgttcccctagaacaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tgtgtgtatcatgcctgacatggcatacaagaatctaactagatgttcccctagaacaaa 400
Query: 125 gctttttctagaacctatcctgaagctgattctgcagtttttgagacatcttttagaaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gctttttctagaacctatcctgaagctgattctgcagtttttgagacatcttttagaaca 340
Query: 185 gtaaatatttcttgagctgt-aaaaaaaaataggactttacttatagagtttatattaca 243
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtaaatatttcttgagctgtaaaaaaaaaataggactttacttatagagtttatattaca 280
Query: 244 tgctgtacttagtactgaagttttaaacatagtaaatttcttttattcctaaatacacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgctgtacttagtactgaagttttaaacatagtaaatttcttttattcctaaatacacac 220
Query: 304 ccatgggttgctata 318
|||||||||||||||
Sbjct: 219 ccatgggttgctata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space: 219390
Effective search space used: 219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_d07.g1 MSMg01no231_d07.g1 CHROMAT_FILE:
MSMg01no231_d07.g1 PHD_FILE: MSMg01no231_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:26 2005
(234 letters)
>mm_chr3_25999276_25999909
Length = 634
Score = 422 bits (218), Expect = e-122
Identities = 227/230 (98%)
Strand = Plus / Plus
Query: 1 ccccactctctacagacaccatgaactttctggagcctaattgccagcaatgagagaaaa 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccactctctacagacaccatggactttctggagcctaattgccagcaatgagagaaaa 260
Query: 61 gcagagctatcctcccagaaagagaagccactagataagaggcaaatgcaggcgaagcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagagctatcctcccagaaagagaagccactagataagaggcaaatgcaggcgaagcac 320
Query: 121 ggtgggatcaggcaaaacagacacccagtgaggcaccgtggaagaccacagacatcttca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgggatcaggcaaaacagacacccagtgaggcaccgtggaagaccacagacatcttca 380
Query: 181 aatggtgcttgggtattcaaggaatggattcctttacagaacagcaataa 230
||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 aatggtgcttgggtattcaaggaatggattccttttcagaacagcaataa 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
