XXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCCAGTCCTTTCTGCAGCA
CCATATCTGCCTGCACACCTTCACTTTTCCTGACATGAGGATAATGGACT
AAGCCTCTGAAATTGTAAACCAACCCTAACTAAAATGTTTTCGTTATATG
ACTTGCTGTAGTCGTGGTGTATCTTCACAGCTGTAAACTCCTAAGACAGA
AGTTGGTACCAGGAATGGGGTATTATGTGATGGGCCTGACTGTGCTTTTA
TTTGCAAGACTGTTGTCTCTTGGCATTTGGATTAGAAAAGCAGTTGAATG
TTTAAATGGAGCTTAATGGGCCATCCTAGTAGGGACATGTAAGACAGTGG
TGCTGAGGTGAATTGAATTGTAAGGGGCCCAGATCAAGAGGTTTCAGACG
AGAATTTTACTATGTGGCCTAGAGACTATTTTTGTGATATTTGGCAAATA
ACGTGGTTGCCTTTTGTCCTTGTCCAAAAAGTGACAATAGGACACTGTTT
CCTTAGGCTAAAGTGAAGAGTTTTCTATTAATTCCATTGGCAGAAGAAAT
CTCAATACAGCCTATTATTGACTCTATTGTGAAGTCATTGGTGTCCACTT
TTGTGCACAGCTAAAAATGAAGAGAAACAGGCTGAGAATGGAAAATTTCA
AAATGTACAATTTGATGAGAAAAGGGACACCAGGAAGAGGAATAGTGTTA
AGTCCTGG

TGGCGGCCGCCTGGTTCGGAAGTAGXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXAGGTTCAGCTGAAAGATCCAGTCTGAGTAAACAGGAGAATTATT
TAACCCCTTTCAACGGTGAGGCCTCCATATGCATGTGCAAATAGATTCAT
GCACACATATAGACATACACATATGCATGCATGAGTCCATATATGCATGT
GTAACACACATACATGTACCCGTATTTGTATAGATATACATACGTGCATT
CATGCACACTACACAGACACACACATGAGAAAAAGAGTACAATAAAAAAA
TAGTTANTTAATAAAGCCCATTTTTAACACTTGAGACACAGCTGGAAAAA
GCTTTAAAAATAGAATCTGAAGAAGAATGAATCACACCATTCTGTATGAC
ACTTACCACAGGGTCTGGAGTGAAAGAGGAAGTGTCTGAAGACGATCTCC
CTCTCCAGCCCGCACCTGATTCTTTGACCAAACTTTGACTTTGGTGTTTT
TACTGACGATAAAAGAATTTCAAACAGCATTTGGAATTTGTAAATATTTG
TCTAGACAAAAAGCAATTCTGTATATTTACAAATATATATTTACTATGTA
TGTAGATTTTTAGGAAGATATTTAAAAGATTTCTTCAGAATCTTTGGTAG
AACTTGTGATTTCATTTGTGGAGGAAGTTGTATCTGGAAGAAGTCAGCTT
TGGA

Query= MSMg01no233_k01.g1 MSMg01no233_k01.g1 CHROMAT_FILE:
MSMg01no233_k01.g1 PHD_FILE: MSMg01no233_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:22 2005
         (597 letters)



>mm_chr3_26552557_26553554
          Length = 998

 Score = 1060 bits (548), Expect = 0.0
 Identities = 586/600 (97%), Gaps = 5/600 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcaacggtgaggcctccatatgcatgtgcaaatagattcatgcacacatatagacata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 tttcaacggtgaggcctccatatgcatgtgcaaatagattcatgcacacatatagacata 890

                                                                       
Query: 61  cacatatgcatgcatgagtccatatatgcatgtgtaacacacatacatgtacccgtattt 120
           | ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 889 cgcatatacatgcatgagtccatatatgcatgtgtaatacacatacatgtacccgtattt 830

                                                                       
Query: 121 gtatagatatacatacgtgcattcatgcacactacacagacacacacatgagaaaaagag 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gtacagatatacatacgtgcattcatgcacactacacagacacacacatgagaaaaagag 770

                                                                       
Query: 181 tacaataaaaaaatag-ttantt--aataaagcccatttttaacacttgagacacagctg 237
           ||||||||||||| || |||  |  |||||||||||||||||||||||||||||||||||
Sbjct: 769 tacaataaaaaaagagttta--tagaataaagcccatttttaacacttgagacacagctg 712

                                                                       
Query: 238 gaaaaagctttaaaaatagaatctgaagaagaatgaatcacaccattctgtatgacactt 297
           ||||||| ||||||||||||||||||||||||||||||||||  |||||||||||| |||
Sbjct: 711 gaaaaagttttaaaaatagaatctgaagaagaatgaatcacataattctgtatgacgctt 652

                                                                       
Query: 298 accacagggtctggagtgaaagaggaagtgtctgaagacgatctccctctccagcccgca 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 accacagggtctggagtgaaagaggaagtgtctgaagacgatctccctctccagcccgca 592

                                                                       
Query: 358 cctgattctttgaccaaactttgactttggtgtttttactgacgataaaagaatttcaaa 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cctgattctttgaccaaactttgactttggtgtttttactgacgataaaagaatttcaaa 532

                                                                       
Query: 418 cagcatttggaatttgtaaatatttgtctagacaaaaagcaattctgtatatttacaaat 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cagcatttggaatttgtaaatatttgtctagacaaaaagcaattctgtatatttacaaat 472

                                                                       
Query: 478 atatatttactatgtatgtagatttttaggaagatatttaaaagatttcttcagaatctt 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atatatttactatgtatgtagatttttaggaagatatttaaaagatttcttcagaatctt 412

                                                                       
Query: 538 tggtagaacttgtgatttcatttgtggaggaagttgtatctggaagaagtcagctttgga 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tggtagaacttgtgatttcatttgtggaggaagttgtatctggaagaagtcagctttgga 352


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 998
Length adjustment: 10
Effective length of query: 587
Effective length of database: 988
Effective search space:   579956
Effective search space used:   579956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)