CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTGATCTTTCCAGAACTTTTATCATGAATGGGTATTGGATCTTGT
CAAATGCTTTTTCTGCATCTAACCAGATGATCATGTGGTTTTTGTCTTTG
AATTTACAATGGTTTAGGAAGTCGATTGGGCTGTGGTTTTAGAGTATTGC
ATTATTCATGAGATGATTAGCTAGAGCAGAACTCCCTAATTAGAGCCATG
ACTTGGGTGTGAAAGCCCTTGCCCTGGGAGTGTAAAGACCTCACACCTGG
CTTCTAAGACTATAGCTGACCTTAGATAGGGCTGATTTTGTCTCAGTTGT
TTTATTGCCCAGTTCCTGCCAGTCTTTGTGTTTACATTCCTCTGTTTTGT
GTAAGAGTCATTAAGCATCTGGCAACCCTCATTGTACCTTGCCGATGTGT
CACCTAACTTCCCTATTTTCTTCTGTATAAAAAGTTTGATGCTCAATTTG
ACAAATTACATTGAGATTCTACACAATCTCCTGTGTGCATCTGTCTGTCA
TTCATTCCCGCTGACTCTTTGCCCACCTGTGACCAGAGACCCGTTCTACA
CAGACAAGGGACCCAGAGGGTCTGCGCACTCAGAAATCCAACTGCCTCTG
CCTCCCAAATGCTGGGATTAAAGGCGTGTGCCACTCCCCCACCCCTAGGC
CTAATGTTTTACCTCAGCCATTCTCCTGAGAN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCAGAGCTGCCTCTGATTCCCAAGTGCT
AGGATTGAAGTCAGGCACCACCTTGCCTGCTCACTTGTGGGCTTCCATAA
ATGAGTTTGTATATTCATGACCTACAGTCAGAGAAATATCCTCTATATAC
TTTTATTTACTATGGGCATATGCATTACAGTGCATGTCTGGATGTCAGAA
CAAGTTGCTGGAGTCGATTCTCTCCTTGGACCTTGGGGTCCCCAAGGATT
GAGCTCAGGTCATCAGGTTTAGGGGTTTGGTGCCTTTAGCTCCATTATCC
AGTCCATTATCCAGCTATTTTTCTGACCCCAAGAAACACCCATTTAATGA
ATAATAATGGTCTGAAGTAACTACAAAAGAAAAATCTACATGCTTTCCAT
TAAAGTCGTGAATTATGCTGTCTGAAGAACAGGATGGGGCAGGAACCCCA
TGATCACTTTACATTTTGTGAAACTCCTGCTCTAGATGGCTTTGAAGCTG
CGGTGTCATCAGATGGCCAGTTGCTTAGGAATGGAAGACAGTAGCTGCTA
GTCACAGGGACAGCCAAAGACATCAAGAAGCCCATTTCTGCCAACACCCT
GAGCGAACTTGGAAGAGGCTCTGCTGCCATTTCTGTCTCTTTGGAAGGCT
AAGCAGAGGCCCTGGCACAG

Query= MSMg01no233_o05.g1 MSMg01no233_o05.g1 CHROMAT_FILE:
MSMg01no233_o05.g1 PHD_FILE: MSMg01no233_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:42 2005
         (648 letters)



>mm_chr3_69327592_69328639
          Length = 1048

 Score = 1214 bits (628), Expect = 0.0
 Identities = 643/648 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagagctgcctctgattcccaagtgctaggattgaagtcaggcaccaccttgcctgctc 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagagctgcttctgattcccaagtgctaggattgaagtcaggcaccaccttgcctgctc 260

                                                                       
Query: 61  acttgtgggcttccataaatgagtttgtatattcatgacctacagtcagagaaatatcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttgtgggcttccataaatgagtttgtatattcatgacctacagtcagagaaatatcct 320

                                                                       
Query: 121 ctatatacttttatttactatgggcatatgcattacagtgcatgtctggatgtcagaaca 180
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ctatatacttttatttactatgggcatatgcattacagtgcatgtctggaagtcagaaca 380

                                                                       
Query: 181 agttgctggagtcgattctctccttggaccttggggtccccaaggattgagctcaggtca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttgctggagtcgattctctccttggaccttggggtccccaaggattgagctcaggtca 440

                                                                       
Query: 241 tcaggtttaggggtttggtgcctttagctccattatccagtccattatccagctattttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaggtttaggggtttggtgcctttagctccattatccagtccattatccagctattttt 500

                                                                       
Query: 301 ctgaccccaagaaacacccatttaatgaataataatggtctgaagtaactacaaaagaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgaccccaagaaacacccatttaatgaataataatggtctgaagtaactacaaaagaaa 560

                                                                       
Query: 361 aatctacatgctttccattaaagtcgtgaattatgctgtctgaagaacaggatggggcag 420
           ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 aatctacatgcttgccattaaagtagtgaattatgctgtctgaagaacaggatggggcag 620

                                                                       
Query: 421 gaaccccatgatcactttacattttgtgaaactcctgctctagatggctttgaagctgcg 480
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 gaaccccatgatcactttacattttgtgagactcctgctctagatggctttgaagctgcg 680

                                                                       
Query: 481 gtgtcatcagatggccagttgcttaggaatggaagacagtagctgctagtcacagggaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgtcatcagatggccagttgcttaggaatggaagacagtagctgctagtcacagggaca 740

                                                                       
Query: 541 gccaaagacatcaagaagcccatttctgccaacaccctgagcgaacttggaagaggctct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gccaaagacatcaagaagcccatttctgccaacaccctgagcgaacttggaagaggctct 800

                                                           
Query: 601 gctgccatttctgtctctttggaaggctaagcagaggccctggcacag 648
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gctgccatttctgtctctttggaaggctaagcagaggccctggcacag 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)