Query= MSMg01no234_g14.b1 MSMg01no234_g14.b1 CHROMAT_FILE:
MSMg01no234_g14.b1 PHD_FILE: MSMg01no234_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:23 2005
(189 letters)
>mm_chr3_88815150_88815741
Length = 592
Score = 354 bits (183), Expect = e-102
Identities = 188/191 (98%), Gaps = 3/191 (1%)
Strand = Plus / Minus
Query: 1 gcctctgtgggtacctatattcaaatgtacatagtgacacaggtaattaa---aacaaca 57
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 391 gcctctgtgggtacctatattcaaatgtacatagtgacacaggtaattaaaacaacaaca 332
Query: 58 aaaccccaaaaatcctcctgtgtacatcatgagtgtgagattacatccatagaccaactg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aaaccccaaaaatcctcctgtgtacatcatgagtgtgagattacatccatagaccaactg 272
Query: 118 ttttctctctttatctattctggataccagtaaattatgaacagcatgtcttgtaaatac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttttctctctttatctattctggataccagtaaattatgaacagcatgtcttgtaaatac 212
Query: 178 accctaccata 188
|||||||||||
Sbjct: 211 accctaccata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 592
Length adjustment: 8
Effective length of query: 181
Effective length of database: 584
Effective search space: 105704
Effective search space used: 105704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no234_g14.g1 MSMg01no234_g14.g1 CHROMAT_FILE:
MSMg01no234_g14.g1 PHD_FILE: MSMg01no234_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:23 2005
(238 letters)
>mm_chr3_88666964_88667601
Length = 638
Score = 437 bits (226), Expect = e-127
Identities = 235/238 (98%)
Strand = Plus / Plus
Query: 1 tctgcctcccaagctctgggatcaaaggtgtacaccaccattcctagcctggaagacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcctcccaagctctgggatcaaaggtgtacaccaccattcctagcctggaagacagt 260
Query: 61 aaacctacactgttttgaggagagatatactaataggatgcattacaaagggtgtagtgt 120
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 261 aaacctacactgttttgaggagagatatactaataggatgcattgcagagggtgtagtgt 320
Query: 121 ggagaatttacaagcattattttcacatcctgaatgccttttccttctacatgcccagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagaatttacaagcattattttcacatcctgaatgccttttccttctacatgcccagcc 380
Query: 181 catggaggatagtctcattgcgttccgaacacgttctaaaatgccactaaaagatgtt 238
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 catggaggatagtctcattgcgttccgaacacgttctaagatgccactaaaagatgtt 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
