Query= MSMg01no236_f03.b1 MSMg01no236_f03.b1 CHROMAT_FILE:
MSMg01no236_f03.b1 PHD_FILE: MSMg01no236_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:51 2005
(510 letters)
>mm_chr3_28348670_28349580
Length = 911
Score = 932 bits (482), Expect = 0.0
Identities = 503/510 (98%), Gaps = 3/510 (0%)
Strand = Plus / Plus
Query: 3 ggaattccttttggctttc-tgaaaaaa-agtcttcgcttggtgactaggagacaggtag 60
||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 203 ggaattccttttggc-ttcttgaaaaaacagtcttcgcttggtgactaggagacaggtag 261
Query: 61 catttccctcccatggctctgccatctctaaaatgcatcttgcagcacttctgaatcaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 262 catttccctcccatggctctgccatctctaaaatgcatcttgcagcacttttgaatcaaa 321
Query: 121 cttttagaagagtctaggccagatgttagaagaagcatgctagtaagtattactaataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cttttagaagagtctaggccagatgttagaagaagcatgctagtaagtattactaataga 381
Query: 181 gactacaagggttacttgcatttcacttctgcttagcaattggctagaaacagatgacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gactacaagggttacttgcatttcacttctgcttagcaattggctagaaacagatgacta 441
Query: 241 ttctttctagcaacgatgtaagctggtagagtctacatttactccagattcagaacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttctttctagcaacgatgtaagctggtagagtctacatttactccagattcagaacatat 501
Query: 301 ggtcagttcctaccaagacttgtgtgttttcaggctatgtagacaaaaatgcagatcttt 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggtcagttcctatcaagacttgtgtgttttcaggctatgtagacaaaaatgcagatcttt 561
Query: 361 gtagatctttatataattcacagctttgttgttacatcaaggttccccttcttttagaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gtagatctttatataattcacagctttgttgttacatcaaggttccccttcttttagaat 621
Query: 421 gtgtgtggacatgtatgcatgtgcatgtgtgtatgttacatgcttgatgtattgcataat 480
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 622 gtgtgtggacatgtatgcatatgcatgtgtgtatgttatatgcttgatgtattgcataat 681
Query: 481 aaaactaaagcttcagaccagcaaagcatg 510
||||||||||||||||||||||||||||||
Sbjct: 682 aaaactaaagcttcagaccagcaaagcatg 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space: 450500
Effective search space used: 450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_f03.g1 MSMg01no236_f03.g1 CHROMAT_FILE:
MSMg01no236_f03.g1 PHD_FILE: MSMg01no236_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:51 2005
(347 letters)
>mm_chr3_28471739_28472485
Length = 747
Score = 557 bits (288), Expect = e-163
Identities = 320/334 (95%), Gaps = 9/334 (2%)
Strand = Plus / Minus
Query: 1 tcctgcagtctttaaccttgataaatcccctggcagagaagagagattacc-cactggcc 59
|||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 330 tcctgcagtctttaaccttgataaatcccctggcagagaagagagaaaacctaac-ggcc 272
Query: 60 ctgtgggctcagtctcaacctcttagggtggcttagtaagagcggagcctgtcaggtttg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctgtgggctcagtctcaacctcttagggtggcttagtaagagcggagcctgtcaggtttg 212
Query: 120 agttggcttaacagtggttctcaaccttcctattgctgggaccctttcatacatttcctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 agttggcttaacagtggttctcaaccttcctattgctgggaccctttcatacatttcctc 152
Query: 180 atgatgcggtgaccccctgcccccaaccataaaattatttcatcgatgcttcataactgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atgatgcggtgaccccctgcccccaaccataaaattatttcatcgatgcttcataactgt 92
Query: 240 aattttgctactgttatgaatcataatataaatatctgatctgtaggacctgatatgtga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 aattttgctactgttatgaatcataatataaatatctgatctgtaggacctgatatgtga 32
Query: 300 ttcccccccc----gagtagagactctcaggttg 329
|| |||| |||||||||||| |||||||
Sbjct: 31 tttcccc---aaaggagtagagactcacaggttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
