Query= MSMg01no236_m18.b1 MSMg01no236_m18.b1 CHROMAT_FILE:
MSMg01no236_m18.b1 PHD_FILE: MSMg01no236_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:27 2005
(321 letters)
>mm_chr3_78013450_78014170
Length = 721
Score = 605 bits (313), Expect = e-178
Identities = 319/321 (99%)
Strand = Plus / Plus
Query: 1 gcagtagagaaggaagttttatctgagatcctatgcacaaggtgagaagtagagcagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcagtagagaaggaagttttatctgagatcctatgcacaaggtgagaagtagagcagata 260
Query: 61 aatgaggcagaaaatgaaattgacatgggatgtcttagaacaggcagttgctttgttaat 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 aatgaggcagaaaatgaaattgacatgggatgttttagaacaggcagttgctttgttaat 320
Query: 121 cagccacatgtgatacatcaggatgaaagtacaagagcatgggaatgaattagaagtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagccacatgtgatacatcaggatgaaagtacaagagcatgggaatgaattagaagtcac 380
Query: 181 aatgtggtgatggagtagctttccatagttactgggtccacattcatgcctctcacttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgtggtgatggagtagctttccatagttactgggtccacattcatgcctctcacttct 440
Query: 241 ctcctcaccagactataaagagtgagcgctgtttggacacaggagttacttttctttacg 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 ctcctcaccagactataaagagtgagcgctgtttggacacgggagttacttttctttacg 500
Query: 301 aatgacttgagtttgtgtcct 321
|||||||||||||||||||||
Sbjct: 501 aatgacttgagtttgtgtcct 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_m18.g1 MSMg01no236_m18.g1 CHROMAT_FILE:
MSMg01no236_m18.g1 PHD_FILE: MSMg01no236_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:27 2005
(287 letters)
>mm_chr3_78161411_78162097
Length = 687
Score = 493 bits (255), Expect = e-144
Identities = 264/267 (98%), Gaps = 2/267 (0%)
Strand = Plus / Minus
Query: 20 gcagggctgagaaggattgcactattatgatactaagtgctcacctttacctttcttttt 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 485 gcagggctgagaaggattgcactattatgatactaagtgctcacctttacctttc-tttt 427
Query: 80 agaggaaaagttatttcagtctaatttagtagcaattatttcactattttagctttagcc 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agaggaaaagttatttcagtctaatttagtagcaattatttcactattttagctttagcc 367
Query: 140 ttaaatttaataagc-aaaaaaaatcaattttcccaaatattttattttactcacctgca 198
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttaaatttaataagcgaaaaaaaatcaattttcccaaatattttattttactcacctgca 307
Query: 199 gagagctatttctactatctactataatattagccattcaataagtaattattagatgta 258
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 306 gagagctatttctactatctactctaatattagccattcaataagtaattattagatgta 247
Query: 259 ttaaagattcatgaattattgagaatg 285
|||||||||||||||||||||||||||
Sbjct: 246 ttaaagattcatgaattattgagaatg 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
