CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGG
AATTCGGTGCCTTACTCATGCCATAAGAGAGTCTTCAACAGAGCGTGACT
CAGACTCACAGGTACTCTTAGACCAGGCACCCCTAGGGAGGCCTATCTCC
CTCACTGCATGAAGGATGGGGCTGGAGGTGATTTTAAAGTAATTTAAAAC
TTTCAAAAACCTTATAAATGCCTGAAAACAGTGTACATGGTGTGCAGGTC
TTTTCAAGAGAACGTATCATAAGTAAAATCTTCTCCATTTGAAATATTAA
GAGGAGACACATTTCTGCATTAACATTTTTTTAAGTGAAGAACCAATTCT
TTCTATCCTAACGAGTTTTGATTCTACTATATATTTGTGATGATGACTTC
ATACAGTAAGCATGTATGTAGATTGACTAATACTTTGCTGTTTGCTTGTT
TGTTGACCAAATATTTACTGAGCACCTCTCCCTTTAAACAAGCTAAATAC
TTTGGGAGATTTTAAATGTTTACCACAAAAATAAATAGATACCCTAATAA
CTTATGTCTGAGTGGAAACAAATACAATTATTCACATATCTACGATAAAT
AATAAGGGGCAGTAGGCTACCCAACAAGAGTGTAAGCCAGTCATCACTCT
CCGGTGTGTCGGAGGGGATAGTGGAACTTTTAGATTTTTTTTCTTTTTTT
GCAAAATCTCATGTTCAGCTCTTTAAAAATGTGATGCCTTTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCATCTAGAGGGTTTAAATTAAACA
GTAGTATATGTGCAAGTTTTTTGACCGTTATTCATGGTATTCTTTGGGTC
CTTAAAAATCCTAATGAATATTTGAAATAATTTGATGATGAAAGGTGATG
TTTGTAAATGGTAACCTAGGATCTGAATCTACTTAAAAATAATTAGGTAT
CATACTTGCAAGTACTTATGATTTAATGATTTTCAACAGTTGCTGTGTTT
GTGTCCCAAGAAAACATGAGCTCTTGCTTGCTAGTTTGTTTTCTCTTTTC
TGGTCTTAGGATAGATACTACCCACCCACCACCCTAAAAGTAGAAAATGT
TTTAACAACCTCTGCTTATCTTGTAAAAATAAGAAATGCATTTGGTGGTC
TTTTGCTTTTACTCAAGGTTTAACTGCAAAGACAAGATGTGCATGTGCCA
TCTATGGAAGGATATATTTTCTTCATAGAAAAAATATTATTGAGGATACT
CTCCTGTGCCTGAAGATAAAATCAGAGAGCATTATTTATTTATTTGTATG
AATGTTTATTTAAAAGGTGGTAAACCAAATATATATATATATATTAATAA
TTTTGTTGCAGAGAAATTATATAAACTGGGAATATCAACTGGAAATATTA
TTGTACTTACTACAGCATTCTGACAAGAATATATACAAAATCCTTGA

Query= MSMg01no237_c23.b1 MSMg01no237_c23.b1 CHROMAT_FILE:
MSMg01no237_c23.b1 PHD_FILE: MSMg01no237_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:56 2005
         (614 letters)



>mm_chr3_139614529_139615543
          Length = 1015

 Score = 1098 bits (568), Expect = 0.0
 Identities = 598/608 (98%), Gaps = 1/608 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaattcggtgccttac-tcatgccataagagagtcttcaacagagcgtgactcagactca 66
           |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 208 gaattcggtgccttacatcatgccataagagagtcttcaacagcgcgtgactcagactca 267

                                                                       
Query: 67  caggtactcttagaccaggcacccctagggaggcctatctccctcactgcatgaaggatg 126
           |||||||||  |||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caggtactcaaagagaaggcacccctagggaggcctatctccctcactgcatgaaggatg 327

                                                                       
Query: 127 gggctggaggtgattttaaagtaatttaaaactttcaaaaaccttataaatgcctgaaaa 186
           ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 328 gggctggagatgattttaaagtaatttaaaactttcaaaagccttataaatgcctgaaaa 387

                                                                       
Query: 187 cagtgtacatggtgtgcaggtcttttcaagagaacgtatcataagtaaaatcttctccat 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cagtgtacatggtgtgcaggtcttttcaagagaacgtatcataagtaaaatcttctccat 447

                                                                       
Query: 247 ttgaaatattaagaggagacacatttctgcattaacatttttttaagtgaagaaccaatt 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttgaaatattaagaggagacacatttctgcattaacatttttttaagtgaagaaccaatt 507

                                                                       
Query: 307 ctttctatcctaacgagttttgattctactatatatttgtgatgatgacttcatacagta 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ctttctatcctaacgagttttgattctactatatatttgtgatgatgacttcatacagta 567

                                                                       
Query: 367 agcatgtatgtagattgactaatactttgctgtttgcttgtttgttgaccaaatatttac 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agcatgtatgtagattgactaatactttgctgtttgcttgtttgttgaccaaatatttac 627

                                                                       
Query: 427 tgagcacctctccctttaaacaagctaaatactttgggagattttaaatgtttaccacaa 486
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ggagcacctctccctttaaacaagctaaatactttgggagattttaaatgtttaccacaa 687

                                                                       
Query: 487 aaataaatagataccctaataacttatgtctgagtggaaacaaatacaattattcacata 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaataaatagataccctaataacttatgtctgagtggaaacaaatacaattattcacata 747

                                                                       
Query: 547 tctacgataaataataaggggcagtaggctacccaacaagagtgtaagccagtcatcact 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tctacgataaataataaggggcagtaggctacccaacaagagtgtaagccagtcatcact 807

                   
Query: 607 ctccggtg 614
           || |||||
Sbjct: 808 cttcggtg 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1015
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1005
Effective search space:   607020
Effective search space used:   607020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)