Query= MSMg01no237_e03.b1 MSMg01no237_e03.b1 CHROMAT_FILE:
MSMg01no237_e03.b1 PHD_FILE: MSMg01no237_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:02 2005
(470 letters)
>mm_chr3_87186667_87187535
Length = 869
Score = 862 bits (446), Expect = 0.0
Identities = 464/472 (98%), Gaps = 5/472 (1%)
Strand = Plus / Plus
Query: 1 gactacaggacagaactccagactcctgctgtgtctgccttctttcttcccc--gctagg 58
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 gactacaggacagaactccagactcctgctgtgtctgccttctttcttc---ttgctagg 257
Query: 59 ttggccccatcaggagagagggttgcaggtgcctagcccctccctttgtctgctcagttc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttggccccatcaggagagagggttgcaggtgcctagcccctccctttgtctgctcagttc 317
Query: 119 caaatgctgagaagttataaatccaatggggattacagatgtctactgagagaagatgta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 caaatgctgagaagttataaatccaatggggattacagatgtctactgagagaagatgta 377
Query: 179 gggtagttcatacacgagcagttgctaactgtaggtgtaactggtatctaaaaggattct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gggtagttcatacacgagcagttgctaactgtaggtgtaactggtatctaaaaggattct 437
Query: 239 acaaaattgtaggaatggtctgaggttatacacactgaactaggactccccagagatcca 298
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 438 acaaaattgtaggaagggtctgaggttatacacactgaactaggactccccagagaccca 497
Query: 299 gaggactcagtattttcatctggcaaatgttttcattcctaacagggaaactattaaagt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaggactcagtattttcatctggcaaatgttttcattcctaacagggaaactattaaagt 557
Query: 359 ctcccaaattgagaggttatcagggttaagcaaatgcccaaagagactgtggaactcatg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctcccaaattgagaggttatcagggttaagcaaatgcccaaagagactgtggaactcatg 617
Query: 419 ggctgatgggactgtgaggaggctgaggtaagcacctacatcgaaagagaca 470
|||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 618 ggctgatgggactgtgaggaggctgagggaagcacctacatcgaaagagaca 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 869
Length adjustment: 10
Effective length of query: 460
Effective length of database: 859
Effective search space: 395140
Effective search space used: 395140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_e03.g1 MSMg01no237_e03.g1 CHROMAT_FILE:
MSMg01no237_e03.g1 PHD_FILE: MSMg01no237_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:02 2005
(298 letters)
>mm_chr3_87297700_87298397
Length = 698
Score = 553 bits (286), Expect = e-162
Identities = 295/298 (98%)
Strand = Plus / Minus
Query: 1 ttagtggggtcactgacagcagctttgggtgaggagtcactttcatctccatgatgcaaa 60
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 665 ttagtggggtcactgacagcagctttgggtgaggagtcacttgcatctgcatgatgcaaa 606
Query: 61 atccctaccccaaagtgggtggtgacttagaaagctgcaccctggggctccctgcacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atccctaccccaaagtgggtggtgacttagaaagctgcaccctggggctccctgcacagc 546
Query: 121 ttacaggcagctctacactcccaggaatctcctttcagcccctcagtctccttccccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttacaggcagctctacactcccaggaatctcctttcagcccctcagtctccttccccagc 486
Query: 181 agatgtttattgcccctgcacctctgcagagggcctctcataaatcctgtgggtttcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 agatgtttattgcccctgcacctctgcagagggcctctcataaatcctgtgggtttcagc 426
Query: 241 tatccaagatacacgaagaaggctgtttaccttctgagtctcacagtcttcctcccct 298
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tatccaagacacacgaagaaggctgtttaccttctgagtctcacagtcttcctcccct 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
