ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTCTGCTTTGCCGGACTGTTAATCTTGCGTGTTGCCTAATGAAACTGT
AAACGGAAAATTATAGCTTCACTCCAGAGAGTGAGAAGGCTTATTCCAAC
AGATGGCATCAAAACACCGTCTACACTGTGGCCGCTGATTGTTAATTGTG
CCTGTGAAACAATCCTTTTAAACAGAGTAATGCATTTTATCGTCCAGATT
ACAGCTCTCTGCTTTTGGTTTTCTCAATGTGTGTTAACATTTTCTGTAAG
AAAGTGTAAGATTTAGTGATTGCCTAATTATCATATTAAACAACAGAACA
ACAGCCAACTCAATCATCTTTATGAACTGTGCACTAGGGAGACAGATAAC
TACCATGCACATATTTAAAGACATGCTGTTTGAGAATGTTTGGGTTCTTA
CTCAGTTTGTATAAACCAGGAGGAATGGGCCAGGTCTAACCTCATCAAAT
AAAAACGGTATAAACAAAAACACCTTAGGCATATGATAAATGCTAACTAT
ACATTAAATGCAGCTCGTTCTGGGTAGAAATGTATATAATTCACATAGAA
CTTTTAAATGGAGGGGAGCTGTGTAAGGCACAAAGAAAAGGACTATTCTC
TGAAATATTTAGAAATTATAGTTTCAGTGAAATCCGACCAACAAGAGAAG
GTGTGCGTTTGACGGTATTGTGCCGAACAAGACCATTCCAGAAATATT

CTATCTCGATGATAGGGGTAGGCGGGTGNGNCTGTTTCCGACCTGANGNG
AANNANNGGAGGTTCCAGAAGGGGGGGGNGGGGGGGGAGGAGTTGNAGGG
GGGGGATGGAAGATTTTCCCCCTTTTTGTTTTGGGTTGGTTTGGTTCTCT
CGTTTGGGTCGTGGGTGTCCCTCGTGGCTGTCGGCTTGTCCCGGGGCCGT
CACGCGCCGTCCTTGTGGTGGCCGTCCCCCGGTTCTTTTTTTCCTTTCTT
GTGAGGTTCCGTCGTTCTTTCTTTGGTTTTCGCCGTGGGGTTTGTTGCTT
GGCGGCCCCTGCTCTTCTGGTGGGTTTTTTTCTCTGGGCGCGGCCGGGAG
GGTTTTTTTTTTTTTTTTCCGCCGACCCCGCCGGGTATACTTTGCTCGTT
ATCTTCTTTCTGTTTTTTTTCCCCCCCCCCCCCCACCTCATTTGTGGGTT
ATGGTCGCGTTTGCCTTTCCCCCCGTTTGTCGCGCGTTGGGTCCCCCCCC
CCACGTTTTTCCGCTCCCGTTTTTTGCTCCGCGTTGTTGTTATTTCGCCC
GCTTATCCGCGTTACGCCGTTGCGCCTTCGCAGTTCGGTGGCGTGCCGCG
CGGTGCGCGGCCCGCGCCTCCGTGATGGGGCGGTTCTTAAGGCTGCTCTC
TGCGGCGGTTGATGGGGTGTGCGATAGGGGCCGCGCACTGCGATGTGCTC
TGGGCTGTCCCGTGTTCCCCATCCATCCCCAGTGCCCTTTCACTCGCCGC
TAGTTCACGGTGGGTGCCTTCACCGCTTTGCCTTCTCGCCCGCCTCTTTG
TTTGTCTCGGCCTTTTTCTTGCCGCGGCCTTCTTCGTCTTGTCTGCTGTC
TCCT

Query= MSMg01no260_h17.b1 MSMg01no260_h17.b1 CHROMAT_FILE:
MSMg01no260_h17.b1 PHD_FILE: MSMg01no260_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:35 2005
         (565 letters)



>mm_chr3_34186679_34187643
          Length = 965

 Score = 1038 bits (537), Expect = 0.0
 Identities = 555/561 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctctgctttgccggactgttaatcttgcgtgttgcctaatgaaactgtaaacgg 64
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctctgctttgggggactgttaatcttgcgtgttgcctaatgaaactgtaaacgg 264

                                                                       
Query: 65  aaaattatagcttcactccagagagtgagaaggcttattccaacagatggcatcaaaaca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaattatagcttcactccagagagtgagaaggcttattccaacagatggcatcaaaaca 324

                                                                       
Query: 125 ccgtctacactgtggccgctgattgttaattgtgcctgtgaaacaatccttttaaacaga 184
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 325 ccgtctacactgtggccgctgattgttaattgtgcctgtaaaacaatccttttaaacaga 384

                                                                       
Query: 185 gtaatgcattttatcgtccagattacagctctctgcttttggttttctcaatgtgtgtta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtaatgcattttatcgtccagattacagctctctgcttttggttttctcaatgtgtgtta 444

                                                                       
Query: 245 acattttctgtaagaaagtgtaagatttagtgattgcctaattatcatattaaacaacag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acattttctgtaagaaagtgtaagatttagtgattgcctaattatcatattaaacaacag 504

                                                                       
Query: 305 aacaacagccaactcaatcatctttatgaactgtgcactagggagacagataactaccat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacaacagccaactcaatcatctttatgaactgtgcactagggagacagataactaccat 564

                                                                       
Query: 365 gcacatatttaaagacatgctgtttgagaatgtttgggttcttactcagtttgtataaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcacatatttaaagacatgctgtttgagaatgtttgggttcttactcagtttgtataaac 624

                                                                       
Query: 425 caggaggaatgggccaggtctaacctcatcaaataaaaacggtataaacaaaaacacctt 484
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 625 caggaggaatgggccaggtctaacctcatcaaataaaaacgatataaacaaaaacacctt 684

                                                                       
Query: 485 aggcatatgataaatgctaactatacattaaatgcagctcgttctgggtagaaatgtata 544
           | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 685 aagcatatgataaatgctaactatacatgaaatgcagctcgttctgggtagaaatgtata 744

                                
Query: 545 taattcacatagaacttttaa 565
           |||||||||||||||||||||
Sbjct: 745 taattcacatagaacttttaa 765


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)