XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CTATTTATTTCCATATTCCAAATTTTAATTGGGTTATTGGGTTGTTGGTG
TCAAAATTCTTGAGCCCTTCTATATATCTTGGAGATTACCCCTCTGTCAG
ATATCAGATGTAGAAGATATTTTCCCAATCTTTTGGGTGTATTTTGGTCC
TAATGATGGTGTCCTTTCACTTACAGAAGTTACTCAGTTTCATGAGATCT
CATTTATTAATTGTTTATCTCAGTCCCTGAGCTATTGGTGATCTGTTCAG
GAAGATGCTTCCTGTACCAAAGAGTTCAATGTTATTCCCCACTTTCTATT
CTATTTGATTTATTGTATCTGGCTTTATGTTTAGGTCTTTAATACATTTT
GTCTCAATGTAATTCACTATATAAACAAACTCAAAGACAAAAACCACATG
ATCATCTCATTAGATGCTGAGAAAGCATTTGACAAAATCCAAAACCCTTT
CATGATAAAAGTTTTAGAAACATCAGGAATTCAAGGCCCATACGTAAACA
TAATAAAAGCAATATAAAGCAAACCAGTAGTCAACATCAAATTAAATCAG
GAGAAACTGGAAGCAATCCCACTAAAATCAGGAATTAGACCAAGCTGCCC
ACTTTCTCCTTACCTATTCCATACAGTACTTGGAGTCCGAACCAGAGTAA
TTAGACAACCAAAGGTAGATCAAAGGGTTTCTAA

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTGATGTACTTTTTAATTACAGTTTCT
AAGCTACATCACTTTATATCTGCTTGAATAATTTCTATTAACTTTTTTGT
GTGGAACAGATTTGCTAAACAATAATTTTGCTTTTGTTTCTGAAAGATAA
TTCCTTCCCAAACCTGTAGGATAATTTTGCTAGGTTAAAAAGTTATTGGA
TGATTTTTAAAAATACTTTAAATATTTGTGCTTATTTTTCCTTTTTATTA
AATGGCTTTAGAGGAGGATATGTAATGTTGATATTCTCTGCTGTATATTT
AAAGTGTGTTATAATCATCATTTAGCTTTGTTCCACCTTTGGTTTTCCTG
TATCTAGAAGATATGCCATGCACTTTTTCATAGTTGTGGCATATCAGTCC
ATCATGGTGGTAGTCAAGCACCTCACATCCCAAGTACAGCAGGATTCAAA
GTGCTAGAGTCTTCATGGTCTGGCCCTAGGGGCCTTATAGCTTCAAGGTA
GACCTTATACCTTAAAGATCCACAACATTTCAAAGCAGCAACATCAAACT
GGAACCATGTGTTTAAACCTGTGGTAGGGACAAGAAAATTCAGAAATTTT
ATCTATTTATATTTATATCACAGTAGTTACTATGCCTGGGTATGTTTCTT
CTGCTTTTGTTCGTTTAACTTTCTTCTTC

Query= MSMg01no261_j04.g1 MSMg01no261_j04.g1 CHROMAT_FILE:
MSMg01no261_j04.g1 PHD_FILE: MSMg01no261_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:00 2005
         (546 letters)



>mm_chr3_76812358_76813303
          Length = 946

 Score =  760 bits (393), Expect = 0.0
 Identities = 399/401 (99%)
 Strand = Plus / Minus

                                                                       
Query: 146 aggataattttgctaggttaaaaagttattggatgatttttaaaaatactttaaatattt 205
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 946 aggataattttgctaggttaaaaagttattggatgattttttaaaatactttaaatattt 887

                                                                       
Query: 206 gtgcttatttttcctttttattaaatggctttagaggaggatatgtaatgttgatattct 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 gtgcttatttttcctttttattaaatggctttagaggaggatatgtaatgttgatattct 827

                                                                       
Query: 266 ctgctgtatatttaaagtgtgttataatcatcatttagctttgttccacctttggttttc 325
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 826 ctgctgtatatttaaagtgtgttatagtcatcatttagctttgttccacctttggttttc 767

                                                                       
Query: 326 ctgtatctagaagatatgccatgcactttttcatagttgtggcatatcagtccatcatgg 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ctgtatctagaagatatgccatgcactttttcatagttgtggcatatcagtccatcatgg 707

                                                                       
Query: 386 tggtagtcaagcacctcacatcccaagtacagcaggattcaaagtgctagagtcttcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tggtagtcaagcacctcacatcccaagtacagcaggattcaaagtgctagagtcttcatg 647

                                                                       
Query: 446 gtctggccctaggggccttatagcttcaaggtagaccttataccttaaagatccacaaca 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gtctggccctaggggccttatagcttcaaggtagaccttataccttaaagatccacaaca 587

                                                    
Query: 506 tttcaaagcagcaacatcaaactggaaccatgtgtttaaac 546
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tttcaaagcagcaacatcaaactggaaccatgtgtttaaac 546


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space:   501696
Effective search space used:   501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)