ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCTGGGGTGCTTTGATTGGGTGTTGTGAACACCTGACAAGAAAAC
TGTAGCTGTCTCGATTTAGTGGGGCAGGTGGGGTGGCAGCCAAGAGAGTG
TTTTCAGAAGGTGGGAGGGTGCATCACATGTGAGTCAAAGCAGAAACGAA
ATGCACCAGAGCAGCTCATTCACAGCTTGAGCAAGGACCTGCTGGTTTAC
TGAAATAATCATCTGTACAAAAACAAAATAGATGATAAGAGCAAAAATAT
ACTCTCCCAGGTGCTGCACGCGCACCTGTTAACAGGAATAACCCTTCCCA
GGTGGGAAGTATGATGAGAACGGGGGAGCCATACTTGCCCTCCGGAGAAG
CCACCTGTCCGTGGTGAATAGCTAGCTATTCCAGCTCAGTGATGATAACG
AAAGAAGGTTCATCTTATTCGCTTTTAATCTGCCTGCCTCTGGCGATTTG
AAACAGATATACTAAAAAGCTAGCTAGAGGCTAAAGATAGGAAGATGCTC
TGAACACCTTCCTTTAAGACACCGCATCAACAGCTATTTTTCCTCTTTGG
ATGGTTAATTTATCTTTGATTTCTCAAGCGTTAGCCTATGGATTTGACGG
AACTACTGATACCGTTTGATCAGTTCGATGAACTGGTTCCAACCAAGCAT
AAAAGGTTTTAACCGGACAAGTGAATTATATATTGTTAAA

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTAGGCTTCTTGTATGTTCATGGGC
ATCTATTTCATTAGGGTTGGGAAGTTTTCTTCTATAATTTTGTTGAAGAT
ATTTGCTGGCCCTTTAAGTTGAAAATCTTCATTCTCATCTACTCCTATTA
TCTGTAGGTTGTGTCTTCTCATTGTGTCCTGGATTTCCTGGATATTTTGA
GTTAGGATCTTTTTGTATTTTGCATTTTCTTTGATTGTTGTGCTTATGTT
CTCTATGGAATCTTCTGTATCTGAGATTCTTTCTTTCATTTCTTGTATTT
TGTTGCTGATGCTGGCATCCATGTTTCCAGATTTCTGTTCTAGGTATTCT
ATCTCCAGCGTTGCCTCCCCCCCGCGCTTTCTTTAATGTGCTAATTTTCT
TCTTTATTTTTACAACGTCTTCTTTCCTATCATTACTCCTGTCTTGATAC
CAAAAATCCTTCCTATTCATTTAAATTTTTTTTTTTTGTTTAAATTTGTT
TCTTCTTTTATCTCCACAACTATTTTTCTTTTTTTTTCTTTTTCTCTCCT
TTTTTTTATTTATTCCCCTCCTTATTTTTCTCTCCCACCCCCTCTTTTCC
CTCTTTTTTTTTTTTACCCACCCCCTTTTTTTCTTTACTCCCTCCTTCTC
TTTTTATTTTTTATTCTCCCCCTTTTTTTCCTTCCCCCTTATTTTTCCCC
CCATATTTTTTTTATCTTTCTCTCCTCTTCACCAN

Query= MSMg01no261_m15.b1 MSMg01no261_m15.b1 CHROMAT_FILE:
MSMg01no261_m15.b1 PHD_FILE: MSMg01no261_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:15 2005
         (558 letters)



>mm_chr3_136046195_136047149
          Length = 955

 Score =  986 bits (510), Expect = 0.0
 Identities = 545/558 (97%), Gaps = 3/558 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gattgggtgttgtgaacacctgacaagaaaactgtagctgtctcgatttagtggggcagg 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 gattgggtgttgcgaacacctgacaagaaaactgtagctgtctcgatttagtggggcggg 260

                                                                       
Query: 61  tggggtggcagccaagagagtgttttcagaaggtgggagggtgcatcacatgtgagtcaa 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggtggcagccaagagagtgtattcagaaggtgggagggtgcatcacatgtgagtcaa 320

                                                                       
Query: 121 agcagaaacgaaatgcaccagagcagctcattcacagcttgagcaaggacctgctggttt 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcagaaacgaaatggaccagagcagctcattcacagcttgagcaaggacctgctggttt 380

                                                                       
Query: 181 actgaaataatcatctgtacaaaaacaaaatagatgataagagcaaaaatatactctccc 240
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgaaataatcatctgtagaaaaacaaaatagatgataagagcaaaaatatactctccc 440

                                                                       
Query: 241 aggtgctgcacgcgcacctgttaacaggaataacccttcccaggtgggaagtatgatgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtgctgcacgcgcacctgttaacaggaataacccttcccaggtgggaagtatgatgag 500

                                                                       
Query: 301 aacgggggagccatacttgccctccggagaagccacctgtccgtggtgaatagctagcta 360
           |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||
Sbjct: 501 aacgggggagccatacttgccctccggagaagccacctgtccgtg---aatagctagcta 557

                                                                       
Query: 361 ttccagctcagtgatgataacgaaagaaggttcatcttattcgcttttaatctgcctgcc 420
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 558 ttccagctcagtgatgataacgaaagaaggttcatcttatttgcttttaatctgactgcc 617

                                                                       
Query: 421 tctggcgatttgaaacagatatactaaaaagctagctagaggctaaagataggaagatgc 480
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 618 tctggcgatttgaaacagatatactaaaaagctagctagtggctaaagataggaagatgc 677

                                                                       
Query: 481 tctgaacaccttcctttaagacaccgcatcaacagctatttttcctctttggatggttaa 540
           ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 678 tctgaacaccttcctttaagacaccgcatcaacagctatttatcctcttcggatggttaa 737

                             
Query: 541 tttatctttgatttctca 558
           ||||||||||||||||||
Sbjct: 738 tttatctttgatttctca 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 955
Length adjustment: 10
Effective length of query: 548
Effective length of database: 945
Effective search space:   517860
Effective search space used:   517860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)