XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
ATTTTACAAGACTTCTTCCCCTTCAGGAACTAAGTCATTCGTTATGTTAT
TTACCTTAATAATAGGACATAGCATCAGAAAGAAAAGAAAAGCAAAACAA
AGCAAAATATATCCAGAGGGGTCTTCTTTTAAAGAAATTATTTTTTAAAA
AGATTTATTTGTTTATTTTATGTATATGAGTACATTGTAACTATTTTCAG
ACACACCAGAAGAGGGCATTGAATCGCATTACAGATGGTTGTGAGCCACC
ATGTAGTTGCTGGGAATTGAACTCTGGATCTCTGAAAGAGCAGTCAGTGC
TCTAAACTGCTGAGCCATCTCTTCTGCCCCTAGAGTGGTTTTCTATCCTA
GGTTTCGACAAAGCCGAAAATTTAAAATAAGAAGTAAAAAGAATCTTGGT
ATAGACATCTTTGTAAAGTACTGAGTGAATATAAATACTTTTTCTGCATT
CTTCTCTTTCCTACCATCTAAGGTTAGACAAGGAGAGGATTATTTCAAGT
TTGGGGTGAGAGGGGTATTTTTGCACCCCTTTCCTTCCTCCTTATTCCTC
TTTTTCCTTACTTCCTACGTTTCCGCTCCCCACCTCAATATCCTTGCCTC
CTCCATTTCATCCCCTATCCCTTACTTATTATTAGTTATCCTCACCACTC
TTATCGCTTACCAACCCTTTTCTATACAATATCTTTACCACTGTACCTAT

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTGATAAACTCAACTACACTGTA
TTGCACTCATTGGACTGACTCCCAGTTCTATGACTCTTTCTCCTTGCACT
GCTCTTAAATAACTTTGTTCTGTGTTCTTGTGAAAGTTGGGCATATCCTG
TCTCTTACTCATTCTTTCAAATCTTTCTCTGGTTTATCACTTTACTCCTC
AATTAGAAGTTACTTTCAAACATGTCTGCATCCTTCTACATACCAATTTT
ACCTTTTTTTTTCCTTCATATTTTCCCTGGAAACTGTATACCATCCTACC
ATCCCCTCTCCCCCTGCTTCTATGAGGGTGCTCTGCCACCCACCCACATA
ATCCCCCCTCCTCACCCTGGCATCCCCCTACACTGGGGTATCAAGCCTTC
ACAGAACCAAGGGTCTCTCTTCATATTGATGACCAGCATGGCCATCATCT
ACATATGCAGCTGGAGCCATGAGTCTCTCCTTGTGTACTCTTTGGCTGAT
GGTTTAGTTCCTGGGGGCTGGTATGTATGAAAGGTGTGTCTGTATTACAA
AAGGCATTAAAGATATGTGGCATGTCTGCATTCCAGCCAGGTCATACCTA
AAAGGTCTTGGATGTGATCACATCAGCCACATTTTTGGATTAACATACCC
CTACTGATAGGATATGTTAATCC

Query= MSMg01no262_j19.b1 MSMg01no262_j19.b1 CHROMAT_FILE:
MSMg01no262_j19.b1 PHD_FILE: MSMg01no262_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:18 2005
         (535 letters)



>mm_chr3_114285614_114286548
          Length = 935

 Score =  745 bits (385), Expect = 0.0
 Identities = 391/393 (99%)
 Strand = Plus / Minus

                                                                       
Query: 143 aaagaaattattttttaaaaagatttatttgtttattttatgtatatgagtacattgtaa 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 aaagaaattattttttaaaaagatttatttgtttattttatgtatatgagtacattgtaa 876

                                                                       
Query: 203 ctattttcagacacaccagaagagggcattgaatcgcattacagatggttgtgagccacc 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 ctattttcagacacaccagaagagggcattgaatcgcattacagatggttgtgagccacc 816

                                                                       
Query: 263 atgtagttgctgggaattgaactctggatctctgaaagagcagtcagtgctctaaactgc 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 atgtagttgctgggaattgaactctggatctctgaaagagcagtcagtgctctaaactgc 756

                                                                       
Query: 323 tgagccatctcttctgcccctagagtggttttctatcctaggtttcgacaaagccgaaaa 382
           ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 755 tgagccatctcttctgcccctagagtggttttctatcctaggttttgagaaagccgaaaa 696

                                                                       
Query: 383 tttaaaataagaagtaaaaagaatcttggtatagacatctttgtaaagtactgagtgaat 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tttaaaataagaagtaaaaagaatcttggtatagacatctttgtaaagtactgagtgaat 636

                                                                       
Query: 443 ataaatactttttctgcattcttctctttcctaccatctaaggttagacaaggagaggat 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ataaatactttttctgcattcttctctttcctaccatctaaggttagacaaggagaggat 576

                                            
Query: 503 tatttcaagtttggggtgagaggggtatttttg 535
           |||||||||||||||||||||||||||||||||
Sbjct: 575 tatttcaagtttggggtgagaggggtatttttg 543


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space:   485625
Effective search space used:   485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)