Query= MSMg01no263_a24.b1 MSMg01no263_a24.b1 CHROMAT_FILE:
MSMg01no263_a24.b1 PHD_FILE: MSMg01no263_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:52 2005
(715 letters)
>mm_chr3_139830098_139831212
Length = 1115
Score = 781 bits (404), Expect = 0.0
Identities = 425/432 (98%), Gaps = 2/432 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctacctctggccttcttcaagtttgtatctcaggtgttgcagattatccggc 63
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggaattctctccctctgggcttcttcaagtttgtatctcaggtgttgcagattatccggc 372
Query: 64 ttaagcacttcctcttaacttccttagtcacctcttcggcagtagtaactcattaatggt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttaagcacttcctcttaacttccttagtcacctcttcggcagtagtaactcattaatggt 312
Query: 124 cattgtttaatccatattatttgatagttacagatactgagaactaagtcataacttctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cattgtttaatccatattatttgatagttacagatactgagaactaagtcataacttctg 252
Query: 184 ggtgcaattactatttatctcacctgttacatctctgtaggatgtcattatgtatctata 243
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 251 ggtgcaattactatttatctcatctgttacatctctgtaggatgtcattatgtatctata 192
Query: 244 tgtgtatactatagtatatataataattgctactagaagagagtgtaatcacaactcaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgtgtatactatagtatatataataattgctactagaagagagtgtaatcacaactcaaa 132
Query: 304 aataatcaaataaagaagataatgttggccccacatgagttgaccctcgcagaattcttt 363
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 131 aataatcaaataaagaagataatgttggccccacatgagttgacccttgcagaattcttt 72
Query: 364 caatgaattttgctaaccccttatatctataacaaagttttggtttcaatttgta-ttct 422
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 71 caatgaattttgctaaccctttatatctataacaaagttttggtttcaatttgtaatt-t 13
Query: 423 taacagaaatgt 434
||||||||||||
Sbjct: 12 taacagaaatgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 715
Length of database: 1115
Length adjustment: 10
Effective length of query: 705
Effective length of database: 1105
Effective search space: 779025
Effective search space used: 779025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no263_a24.g1 MSMg01no263_a24.g1 CHROMAT_FILE:
MSMg01no263_a24.g1 PHD_FILE: MSMg01no263_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:52 2005
(667 letters)
>mm_chr3_139661749_139662815
Length = 1067
Score = 1212 bits (627), Expect = 0.0
Identities = 657/667 (98%)
Strand = Plus / Plus
Query: 1 actattttccactagtcttcaggagcatctggaatggtggaaataaaatactggccctct 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 actattttccactagtcttcaggcgcatctggaatggtggaaataaaatactggccctct 260
Query: 61 ttatttctttgcttggacataaaaatatctttcacccgagtgatacgtttgactttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatttctttgcttggacataaaaatatctttcacccgagtgatacgtttgactttgaaa 320
Query: 121 gtttaaattgttgtcttgcttagaataagcgtttattttccttagcacagaaagacaatg 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 gtttaaattgttgtcttgcttagaataagcgtttattttccttagcgcagaaagacaatg 380
Query: 181 tggttactgtgcaattactataatatagggggaaaataacattaaatttaattaagaagt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 tggttactgtgcaattactataatgtagggggaaaataacattaaatttaattaagaagt 440
Query: 241 tttaataaccagaatgctgatatagttctacttcatcatatccaaccttaatgtgtgatt 300
|||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 441 tttaataaccagtatgctgatatagttctacttcatcatatgcaaccataatgtgtgatt 500
Query: 301 tttctaataaactcatgatgtctctcaacattcatttggctcaatctgctgcctatcaca 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttctaataaattcatgatgtctctcaacattcatttggctcaatctgctgcctatcaca 560
Query: 361 gaggggagctggatggttcaaagggaagaataaacaattctctttcttgtataacaagtt 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagggaagctggatggttcaaagggaagaataaacaattctctttcttgtataacaagtt 620
Query: 421 aatttatgtcatagtttgtttctgatgaaactgaagagttaggcagagtagaatctaccc 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatttatgtcatagtttgtttccgatgaaactgaagagttaggcagagtagaatctaccc 680
Query: 481 tagaaaatagagcacagaaaaactgaaaataaaaatgagaggcagggcacatgaacatga 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 tagaaaatagagcacagaaaaactgaaaataaaaatgagaggcaggacacatgaacatga 740
Query: 541 atctgatgatggtgcaccctcattaactcacagtgcaatcttgcaaatacaactaaatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atctgatgatggtgcaccctcattaactcacagtgcaatcttgcaaatacaactaaatat 800
Query: 601 cctggcatgtttagagagctggatgaaccctattaccagaatgtacctggtaataaaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cctggcatgtttagagagctggatgaaccctattaccagaatgtacctggtaataaaaat 860
Query: 661 attctgt 667
|||||||
Sbjct: 861 attctgt 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
