Query= MSMg01no265_b10.b1 MSMg01no265_b10.b1 CHROMAT_FILE:
MSMg01no265_b10.b1 PHD_FILE: MSMg01no265_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:28 2005
(169 letters)
>mm_chr3_6141286_6141854
Length = 569
Score = 327 bits (169), Expect = 2e-94
Identities = 169/169 (100%)
Strand = Plus / Minus
Query: 1 caagataaaccaggaaattagatgctaagctcatcagaatatgaggttatagtgtatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 caagataaaccaggaaattagatgctaagctcatcagaatatgaggttatagtgtatcat 310
Query: 61 tgttgaacaacaataattaaggtgatatctaacatttgtttctcagaaattcctttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgttgaacaacaataattaaggtgatatctaacatttgtttctcagaaattcctttcatt 250
Query: 121 ctccaaactctttgcgcagattggtttggtacttattccagctctgtga 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctccaaactctttgcgcagattggtttggtacttattccagctctgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no265_b10.g1 MSMg01no265_b10.g1 CHROMAT_FILE:
MSMg01no265_b10.g1 PHD_FILE: MSMg01no265_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:28 2005
(496 letters)
>mm_chr3_6025723_6026618
Length = 896
Score = 890 bits (460), Expect = 0.0
Identities = 487/498 (97%), Gaps = 5/498 (1%)
Strand = Plus / Plus
Query: 1 aactaatattttaaatgactgaatgatatcaatatttttaaagaaacatctgagtcacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactaatattttaaatgactgaatgatatcaatatttttaaagaaacatctgagtcacat 260
Query: 61 gataatggtttcttagtacaccattcttgacattgaggttgagagggaacaaacagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gataatggtttcttagtacaccattcttgacattgaggttgagagggaacaaacagaaaa 320
Query: 121 gaatggattcattcaacaaacattttaaaacatcaaataagaataagcatggtgtctcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatggattcattcaacaaacattttaaaacatcaaataagaataagcatggtgtctcat 380
Query: 181 acctttaatcccagcacttgggaggcagaggcaggtggatttctgagttcaaggccagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acctttaatcccagcacttgggaggcagaggcaggtggatttctgagttcaaggccagcc 440
Query: 241 tggtctacaaagtgagttccaggacagccagggctatacagagaaaccctgtctcgaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggtctacaaagtgagttccaggacagccagggctatacagagaaaccctgtctcgaacc 500
Query: 301 cccatccccccccccaaaaa--tcaaataagtgtcagctcctacccacgccggaccagaa 358
|||||||||||| ||||| ||||||||||||||||||||| | | | |||||||||
Sbjct: 501 cccatccccccc---aaaaaaatcaaataagtgtcagctcctatctatgttggaccagaa 557
Query: 359 gctataactttgaaaaataattaaattacagcttcaagacaactcacagaccatatgaag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gctataactttgaaaaataattaaattacagcttcaagacaactcacagaccatatgaag 617
Query: 419 ctcaagaaaaaggtcgaccaaagtatggctgcttcagtcctacatgaaggggtaacaaaa 478
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 618 ctcaagaaaaaggtcgaccaaagtatcgctgcttcagtcctacatgaaggggtaacaaaa 677
Query: 479 taatcacaggaaggatgt 496
||||||||||||||||||
Sbjct: 678 taatcacaggaaggatgt 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
