Query= MSMg01no265_m14.b1 MSMg01no265_m14.b1 CHROMAT_FILE:
MSMg01no265_m14.b1 PHD_FILE: MSMg01no265_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:23 2005
(318 letters)
>mm_chr3_83329740_83330459
Length = 720
Score = 333 bits (172), Expect = 1e-95
Identities = 197/208 (94%), Gaps = 6/208 (2%)
Strand = Plus / Plus
Query: 115 ggcacatttttctaagctaatctttttggtgtttttacaccctgtaggacttccatgata 174
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 315 ggcacatttttctaagctaatctttttggtgtttttataccctgtaggacttccatgata 374
Query: 175 atgctacagagttaagcgcattttaacttgactctttttaggttggttaatgcttttgtt 234
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atgccacagagttaagcgcattttaacttgactctttttaggttggttaatgcttttgtt 434
Query: 235 tgtgtgcttcatttgattttgctttagtttgggagtgaactgagttattaa----tagat 290
| |||||||||||||||||||||||||||||||||||||||||| | || |||||
Sbjct: 435 tatgtgcttcatttgattttgctttagtttgggagtgaactgaggaa--aaaaaatagat 492
Query: 291 ccaatagaagtcttccacctaaggtttt 318
||||||||||||||||||||||||||||
Sbjct: 493 ccaatagaagtcttccacctaaggtttt 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 720
Length adjustment: 9
Effective length of query: 309
Effective length of database: 711
Effective search space: 219699
Effective search space used: 219699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_m14.g1 MSMg01no265_m14.g1 CHROMAT_FILE:
MSMg01no265_m14.g1 PHD_FILE: MSMg01no265_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:24 2005
(279 letters)
>mm_chr3_83470112_83470789
Length = 678
Score = 480 bits (248), Expect = e-140
Identities = 269/276 (97%), Gaps = 3/276 (1%)
Strand = Plus / Minus
Query: 1 tgtcctgagtagtctttaccatatcttgccttcatttaaatctgttcattaccactgtga 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 474 tgtcctgagtagtctttaccatatcttgccttcatttaaatctgctcattaccactgtga 415
Query: 61 atggccagagccagggatgggacttcaaaacttcacctctgatgagttcttttcccctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atggccagagccagggatgggacttcaaaacttcacctctgatgagttcttttcccctgc 355
Query: 121 tccagtcctgtctctctcttttccccttttactattccaccagaaagatccactgggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tccagtcctgtctctctcttttccccttttactattccaccagaaagatccactgggagc 295
Query: 181 tcaacaccccaccccgacccttgttatac-tgttcttgtccttgagatcttggtgtccct 239
||||||||||||||||||||||||||||| | ||||| ||||||||||||||| ||||||
Sbjct: 294 tcaacaccccaccccgacccttgttatacct-ttcttctccttgagatcttgg-gtccct 237
Query: 240 gagtcattgtcctagtgatttctgaagcttgaattg 275
||||||||| || |||||||||||||||||||||||
Sbjct: 236 gagtcattgcccaagtgatttctgaagcttgaattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 678
Length adjustment: 9
Effective length of query: 270
Effective length of database: 669
Effective search space: 180630
Effective search space used: 180630
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
