Query= MSMg01no265_n19.b1 MSMg01no265_n19.b1 CHROMAT_FILE:
MSMg01no265_n19.b1 PHD_FILE: MSMg01no265_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:29 2005
(316 letters)
>mm_chr3_122763688_122764401
Length = 714
Score = 547 bits (283), Expect = e-160
Identities = 302/309 (97%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 5 gaattctcgtatgtgccaggagggcccatatgtgccaactaattctttgacaatactatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcgtatgtgccaggagggcccatatgtgccaactaattctttgacaatactatt 264
Query: 65 atggtaagagtcttcattctatcataaggaaaatgaagtgaaaggtaatttattctcccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atggtaagagtcttcattctatcataaggaaaatgaagtgaaaggtaatttattctcccc 324
Query: 125 actggtgtgtgtgtgtgtgtcagtgtacttgtgattatatactaccaagctggggtgagt 184
|||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actg--gtgtgtgtgtatgtcagtgtacttgtgattatatactaccaagctggggtgagt 382
Query: 185 atataatttgaactccatagccctcctgcctcttcctcccacgtgcaatgattacagcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atataatttgaactccatagccctcctgcctcttcctcccacgtgcaatgattacagcca 442
Query: 245 tgtgccaccattgcacagctaagacatttctatttatcacaaggctgaatagtgaaatct 304
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 443 tgtgccaccattgcacagctaagacatttctaaagaccacaaggctgaatagtgaaatct 502
Query: 305 agtttattt 313
|||||||||
Sbjct: 503 agtttattt 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 714
Length adjustment: 9
Effective length of query: 307
Effective length of database: 705
Effective search space: 216435
Effective search space used: 216435
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_n19.g1 MSMg01no265_n19.g1 CHROMAT_FILE:
MSMg01no265_n19.g1 PHD_FILE: MSMg01no265_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:29 2005
(281 letters)
>mm_chr3_122970386_122971066
Length = 681
Score = 520 bits (269), Expect = e-152
Identities = 278/281 (98%)
Strand = Plus / Minus
Query: 1 cttcctcacccttctctgccacgtcaaacttcctcacccagtacaccaagttgcagaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttcctcacccttctctgccacgtcaaacttcctcacccagtacaccaagttgcagaaac 422
Query: 61 ctgactcagctgcaagcggcgacatggcagagagccacttggcacaaaccggcctcgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgactcagctgcaagcggcgacatggcagagagccacttggcacaaaccggcctcgaat 362
Query: 121 ccaaaccccgagcgctcggattctacaaagacacccttccccttccactgtcacccggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaaaccccgagcgctcggattctacaaagacacccttccccttccactgtcacccggga 302
Query: 181 caagttcgcgtttccctctaatgatgtcccggagctgaacgctgtagttgccattttccc 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 301 caagttcgcgtttccctctaatgatgtcccggagctgaacactgtagttgccattttccc 242
Query: 241 tcgtattatttccagccctctcctcctccgggaaccagaga 281
||| | |||||||||||||||||||||||||||||||||||
Sbjct: 241 tcggaatatttccagccctctcctcctccgggaaccagaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
