Query= MSMg01no267_l09.b1 MSMg01no267_l09.b1 CHROMAT_FILE:
MSMg01no267_l09.b1 PHD_FILE: MSMg01no267_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:50 2005
(318 letters)
>mm_chr3_79114569_79115285
Length = 717
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 5 gaattctttagggaatgtgaattatgcttttaccttatttcccatcagactaaaagtaat 64
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 515 gaattctctagggaatgtgaattatgcttttaccttatttcccatcagattaaaagtaat 456
Query: 65 atacctggttagaatatcagcatttcctccacacattagagagtcataatcagcgccaat 124
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atacatggttagaatatcagcatttcctccacacattagagagtcataatcagcgccaat 396
Query: 125 gtgatacattgaagttttttttccccccatcagtcttttcttaattcctttagacacaga 184
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtgatacattgaagtttttttt-tccccatcagtcttttcttaattcctttagacacaga 337
Query: 185 cagctgagattaatgcaaagtgaagcgttcctgacagaccacttaaatgatgcatccact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cagctgagattaatgcaaagtgaagcgttcctgacagaccacttaaatgatgcatccact 277
Query: 245 ctgttggacttagacatgagcaaaaatggctaccacctgtcatagaggcccttgcaaggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctgttggacttagacatgagcaaaaatggctaccacctgtcatagaggcccttgcaaggc 217
Query: 305 tgtaaggcccca 316
||||||||||||
Sbjct: 216 tgtaaggcccca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_l09.g1 MSMg01no267_l09.g1 CHROMAT_FILE:
MSMg01no267_l09.g1 PHD_FILE: MSMg01no267_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:50 2005
(234 letters)
>mm_chr3_78963508_78964141
Length = 634
Score = 429 bits (222), Expect = e-125
Identities = 228/230 (99%)
Strand = Plus / Plus
Query: 1 gtattactatctagaatgaaaacagtttaagaaggtgtacagtcagacaatagccagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtattactatctagaatgaaaacagtttaagaaggtgtacagtcagacaatagccagcct 260
Query: 61 cttggctccttaaaacaacccattgttgctagttgctgtttatctctgtgttataatgtg 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttggctccttaaaacaacccatagttgctagttgctgtttatctctgtgttataatgtg 320
Query: 121 ataggccctgactgacaagtaatcctgctgaaaggttagggctcttctgctctaatcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataggccctgactgacaagtaatcctgctgaaaggttagggctcttctgctctaatcaac 380
Query: 181 agtagtgcacgctaagtgtcaaagttcactgcaaagaaaaacaaactgaa 230
|||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 agtagtgcacgctaagtgtcaaagttcactgcaaagaaaaccaaactgaa 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
