Query= MSMg01no268_e03.b1 MSMg01no268_e03.b1 CHROMAT_FILE:
MSMg01no268_e03.b1 PHD_FILE: MSMg01no268_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:30 2005
(314 letters)
>mm_chr3_69290296_69291009
Length = 714
Score = 545 bits (282), Expect = e-159
Identities = 303/310 (97%)
Strand = Plus / Plus
Query: 5 gaattcctgatctttctctggagtgtgtgtggtaattgaggagcaaagaattctttctta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaattcctgatctttctctggagtgtgtgtggtaattgaggagcaaagaattcgttcttc 264
Query: 65 atacccttggtagtagggaaataacctcaacttcttaatctgtaaacaggttctaaaaaa 124
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 atacccttggaagtagggaaataacctcagcttcttaatctgtaaacaggttctaaaaaa 324
Query: 125 ataagcccggaggcttaaatgtaggttttgatcaaaataataagaggagctaactcacgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataagcccggaggcttaaatgtaggttttgatcaaaataataagaggagctaactcacgg 384
Query: 185 ctagacagtgtttgatacattggctgattatatcttagaataattagagaccagaagtct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctagacagtgtttgatacattggctgattatatcttagaataattagagaccagaagtct 444
Query: 245 ggaaagtgggttggtatgggttttgtggataaggccagccatccttagatagaaagacat 304
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 ggaaagtgggctggtatgggttttgtggataaggccagccatccttagctagaaagacat 504
Query: 305 actccattgt 314
||||| ||||
Sbjct: 505 actccgttgt 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_e03.g1 MSMg01no268_e03.g1 CHROMAT_FILE:
MSMg01no268_e03.g1 PHD_FILE: MSMg01no268_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:30 2005
(223 letters)
>mm_chr3_69460900_69461523
Length = 624
Score = 373 bits (193), Expect = e-108
Identities = 213/220 (96%), Gaps = 1/220 (0%)
Strand = Plus / Minus
Query: 1 cagggagtgagtggtcctgaccaaagcccatcctggtcatatttaattaaaaacttcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cagggagtgagtggtcctgaccaaagcccatcctggtcatatttaattaaaaacttcacc 361
Query: 61 ctcgtggggagcttggggttcctcactgtttca-taaagcagtctcagcctgatgagatt 119
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 360 ctcgtggggagcttggggttccttactgtttcagtaaagcagtctcagcctgatgagatt 301
Query: 120 gagtctgtctcctatttatttccaggggtaactagggtggggtggggtgtgtgtgataaa 179
|||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 300 gagtctgtcttgtatttatttccagggttaactggggtggggtggggtgtgtgtgataaa 241
Query: 180 gaatttcanttgatgataaacatctattgtgatcctttac 219
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 240 gaatttcagttgatgataaacatctattgtgatcctttac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 624
Length adjustment: 9
Effective length of query: 214
Effective length of database: 615
Effective search space: 131610
Effective search space used: 131610
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
