Query= MSMg01no268_m12.b1 MSMg01no268_m12.b1 CHROMAT_FILE:
MSMg01no268_m12.b1 PHD_FILE: MSMg01no268_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:07 2005
(234 letters)
>mm_chr3_140598433_140599065
Length = 633
Score = 373 bits (193), Expect = e-108
Identities = 223/233 (95%), Gaps = 1/233 (0%)
Strand = Plus / Minus
Query: 1 taagtgacaggggggatgaatctagattagtatttggaggactaatagtagaaatgtgaa 60
||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 432 taagtgaca-gggagatgaatctagattagtatttggaggactaatattagaaatgtgaa 374
Query: 61 aggatgatctacttgggagactatggatttctagagctcaaggaaaaggagctgagacca 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 373 aggatgatctacttgggagaccatggatttctagagctcaaggaaaaggagctgaaacca 314
Query: 121 tcatgggacaaacgcattacaaaacgtctccttcactttgcatttaggacattaatgttg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 313 tcatgggacaaactcattacaaaacgtctccttcactttgcatttaggacagaaatgttg 254
Query: 181 gagtgaggtagaatgtgaggaagagtttgaagagactaaagaaaaacagaccc 233
||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 253 gagtgagatagaatgtgaggaggagtttgaagagactaaagaaaaacagaccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 633
Length adjustment: 9
Effective length of query: 225
Effective length of database: 624
Effective search space: 140400
Effective search space used: 140400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no268_m12.g1 MSMg01no268_m12.g1 CHROMAT_FILE:
MSMg01no268_m12.g1 PHD_FILE: MSMg01no268_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:07 2005
(283 letters)
>mm_chr3_140419878_140420560
Length = 683
Score = 540 bits (279), Expect = e-158
Identities = 282/283 (99%)
Strand = Plus / Plus
Query: 1 aaatttgaaagtaaagaaaattttaaatagctcatttttgttgatattcatgactgctgt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 aaatttgaaagtaaagaaaattttaaatagctcatttttgttgatatttatgactgctgt 260
Query: 61 tgataacatgaactcactacaaaaaggctatcctgtctgtactcagttggcagaacttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgataacatgaactcactacaaaaaggctatcctgtctgtactcagttggcagaacttgg 320
Query: 121 gtgatatctggtccatggcacattgagtgtaagatttgttaacacttatccttaaaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgatatctggtccatggcacattgagtgtaagatttgttaacacttatccttaaaatca 380
Query: 181 cccaaatagattttcctttttaaaaactttctccataaatgtatatggataagagccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaaatagattttcctttttaaaaactttctccataaatgtatatggataagagccatt 440
Query: 241 ttggaactacatatttgaaacccatatggctaaaggctgctaa 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttggaactacatatttgaaacccatatggctaaaggctgctaa 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
