CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTATCAGACTCCCATGATGCTGCATGTTAGTCATAAATGAAAGGAAGA
GACATGACTAAGAAGACTCCCTTCACATTCTGGACATGTCTTCATGTGAA
GTACCTCCTCTTTCTCATGTAAAGCAAGCCTCCTAGGAGGGTTATCTTCT
TAAACCATAACAAGACCGGACACAAACAGCATACATTCTTGCTTTTTGCA
TTAAAAGTATTTAATGAATTCACAGTTCCACTAATTGACCCAAACAAGAC
TTTTGTTAGGCTGCTTTGAGAAGGTTTCTAGCATTCACCTTGATGTGCAA
ACTTAACCAATGCCCAGCAGCAGCCAGGATACAACTCAGTTTACTCCCTG
CAAATCAGTTGACAGCATCATCATTCTCTGATCTATAATCTCATCTCTGG
GTCTTTCTGTTACCTACTTAAGTTCAGCTCTCCTAGCCTGAATTCTCTAT
ATAGCGTGAAATAGCCTTTACATAATCCTAGACATGTGTACTCTGGCTGC
TCATTATCATTACTGCAGTAATCTCTTCTTCCATTTTAATAATTCTTTTT
CCATTCTTCTTTATTTAGATTATAATTACATCATTTTCTTCTNCCTCCCT
TTCTTCCTATGCCTTTTATATTACCTCCTTTCCAACCCTGCTNACTCTCA
ATTTCACAGCCTCTN

ACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTGATCATGAATGG
GTGTTGGATTTGTCGAATTCTTTCTCAGCATCTAATGAGATGATCGTGTG
GTTTTTGTCTTTGAGTTTGTTTATGTAGTGAATTATGTTGATGGATTTCC
TTATATTGAGTCATCCTTGCATCCCTGGGATGAAGCCTACTTGATCATGA
TGGATGATCATTTAGACGTGTTCTTGGGTTTGGTTTGCAAGAGTTTTATT
GAGTATTTTTGCAGTGATATTCATAAGGGAAATTGGTTTGAAGTTCTCTT
TCTTTTTTGTGTCTTTATAGGCCCCACCCATCAGAGTTATTGTGGCTTCA
TAGACATATTGGGTAGAGTACCTTCTTTTTCTATTTTGTGGAATAGTTTG
AGGAGAATTGGAATTACGTCTTCTTTGAAGATCGGATAGAACTCTGTACT
AAACTCATTTTGTCCTGGAATTTTTGGTGGGAGATTATTAATGACTGTTT
TTTATTTCTTTAGGGGATATGGGACCGTTTAGATTGTTAATCTGACCCTG
ATTTAACTTTCACACCTGGTATCTGTCTAGAAAATTGTTCATTTCGTCCA
GGTTTTACAGTTTTGCTGAGTATAGCCTTTTGGAGTAAGATCTGATGATT
TTTTGGATTTCCAAGATTCTATTGTTA

Query= MSMg01no269_b09.b1 MSMg01no269_b09.b1 CHROMAT_FILE:
MSMg01no269_b09.b1 PHD_FILE: MSMg01no269_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:28 2005
         (645 letters)



>mm_chr3_10887245_10888289
          Length = 1045

 Score = 1164 bits (602), Expect = 0.0
 Identities = 631/641 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctatcagactcccatgatgctgcatgttagtcataaatgaaaggaagagacatga 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gaattctatcagacacccatgatgctgcatgttagtcataaatgaaaggaagagacatga 786

                                                                       
Query: 65  ctaagaagactcccttcacattctggacatgtcttcatgtgaagtacctcctctttctca 124
           |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ctaaaaaggctcccttcacattctggacatgtcttcatgtgaagtacctcctctttctca 726

                                                                       
Query: 125 tgtaaagcaagcctcctaggagggttatcttcttaaaccataacaagaccggacacaaac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tgtaaagcaagcctcctaggagggttatcttcttaaaccataacaagaccggacacaaac 666

                                                                       
Query: 185 agcatacattcttgctttttgcattaaaagtatttaatgaattcacagttccactaattg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 agcatacattcttgctttttgcattaaaagtatttaatgaattcacagttccactaattg 606

                                                                       
Query: 245 acccaaacaagacttttgttaggctgctttgagaaggtttctagcattcaccttgatgtg 304
           ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||
Sbjct: 605 acccaaacaagacttttgttaggctgctttgaggaggtttctagccttcaccttaatatg 546

                                                                       
Query: 305 caaacttaaccaatgcccagcagcagccaggatacaactcagtttactccctgcaaatca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 caaacttaaccaatgcccagcagcagccaggatacaactcagtttactccctgcaaatca 486

                                                                       
Query: 365 gttgacagcatcatcattctctgatctataatctcatctctgggtctttctgttacctac 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 485 gttgacagcatcatcattctctgatctataatctcatctctgggtctttctgttacctcc 426

                                                                       
Query: 425 ttaagttcagctctcctagcctgaattctctatatagcgtgaaatagcctttacataatc 484
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttaagttcagctctcctagccttaattctctatatagcgtgaaatagcctttacataatc 366

                                                                       
Query: 485 ctagacatgtgtactctggctgctcattatcattactgcagtaatctcttcttccatttt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctagacatgtgtactctggctgctcattatcattactgcagtaatctcttcttccatttt 306

                                                                       
Query: 545 aataattctttttccattcttctttatttagattataattacatcattttcttctncctc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 305 aataattctttttccattcttctttatttagattataattacatcattttcttctccctc 246

                                                    
Query: 605 cctttcttcctatgccttttatattacctcctttccaaccc 645
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cctttcttcctatgccttttatattacctcctttccaaccc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)