Query= MSMg01no269_k16.b1 MSMg01no269_k16.b1 CHROMAT_FILE:
MSMg01no269_k16.b1 PHD_FILE: MSMg01no269_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:10 2005
(320 letters)
>mm_chr3_131566602_131567321
Length = 720
Score = 571 bits (295), Expect = e-167
Identities = 310/315 (98%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 5 gaattctaaactgggttcaatctagaattttaaaatgtggaatgtaaataaattaattaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctaaactgggttcaatctagaattttaaaatgtggaatgtaaataaattaattaa 265
Query: 65 atgtaaaaataattaactaaaaaaaggtatcattttaaaagctatattgtagctttaagt 124
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 266 atgtaaaaataattaattaaaaaa-ggtatcattttaaaagctatattgtagctttaagt 324
Query: 125 aaaattgttacaggtagctcttcaaaataatatagtagtacttgcttgaatgacagcata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaattgttacaggtagctcttcaaaataatatagtagtacttgcttgaatgacagcata 384
Query: 185 tcagtgtgaaagactccaaaaggagcccctctctcaggcctcaggacaatagcggacacc 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagtgtgaaagactccgaaaggagcccctctctcaggcctcaggacaatagcggacacc 444
Query: 245 caagaactcacgacagtccgagcttgttgcaaaccacatgaggctttattcggggaaagc 304
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 caagaactcacgacagaccgagcttgttgcaaaccacgtgaggctttattcggggaaagc 504
Query: 305 cagagctctggggac 319
|||||||||||||||
Sbjct: 505 cagagctctggggac 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_k16.g1 MSMg01no269_k16.g1 CHROMAT_FILE:
MSMg01no269_k16.g1 PHD_FILE: MSMg01no269_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:10 2005
(338 letters)
>mm_chr3_131740774_131741511
Length = 738
Score = 636 bits (329), Expect = 0.0
Identities = 335/337 (99%)
Strand = Plus / Minus
Query: 1 gtcatttctgcattgtttaaagagtacctagttaatgagagatggaaacaactaaaatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 537 gtcatttctgcattgtttaaagagtacctagttaatgagagatggaaacaactgaaatag 478
Query: 61 cagtgcctgatacaaagatgaaatcatcacagatcaaagtaaaagaggggcagcaatcag 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 cagtgcccgatacaaagatgaaatcatcacagatcaaagtaaaagaggggcagcaatcag 418
Query: 121 aaacagtggtctagcaatcagcaagtcattttgttactaacttaatttgtccatttattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaacagtggtctagcaatcagcaagtcattttgttactaacttaatttgtccatttattt 358
Query: 181 aatttgatttattcgatttactgagtaaattaatagccgcttggaaccacagcaccttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aatttgatttattcgatttactgagtaaattaatagccgcttggaaccacagcaccttta 298
Query: 241 atgagttcaaggcagtgctaaatatgtgaaagcatggtggatatctgatttcactgaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atgagttcaaggcagtgctaaatatgtgaaagcatggtggatatctgatttcactgaaac 238
Query: 301 tgctcgtgacatcatttgttgacatatgtacacttga 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 tgctcgtgacatcatttgttgacatatgtacacttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
