XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTTTTGGTTTTAGCTTTGAAAAATACTTTTCTAAATTTCATTGATATCTG
TAGAAATGTCTTTCTTCTTATCTGTAATATTAATTTGTATCTTCTTTATC
ATGAATTTGGTTAACTTTGTGACAAGTTTACCAATTTGTTTCTTTCCAAA
AACCAATGTCTTCATTCCATTGAAGATTTGTATGTTTTATTTTATGAGTT
CCTGCATTTTGTGTTCATGTTTTTATTTCTTCATTGCCTTAATGTAATTC
ATTATGATATCTACTTATCTGAAAAAAATTATTGTAGGGCACTAAAACGG
TGAATTTTGCCCTTTTGAGTACTTCCCTTATGTAACATATGTAATTATGT
AATTTGGCTGTGTTGTGTTTTCATGTAATCTCTTTAGTGCTTGACAGATT
TATAACAAATTGACACAAGCTAAAGTTATTTGAAAGAAGGGAATTTGTTT
GAGAAAATTACTCTGTAAGTGGCTTTTTTTTTTTTTTTTTTTTTTTAACA
GTTAGTGTTCGATGGGGGAGAGTCCAGCCCATTATGGGTGGTGCCATCCC
TGTGCTGATGGGTTCTATAAGAAAGCAGGCTGAGCAAACCGGGATGAGCA
AGACAGTAAGCAACACCACCCAGCATCAGTTCTTGGTTCTGGATTCCTGC
CCTGCTTACGTTCCTGTCCTGAATTTTATTGAG

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTGGGTACCAACTTAACTGAAAATGA
AAACTGATGATTTCTTTGACAGTTCCTGTCTCAAGGGAATAAACAGAGAA
TAATACAAAAAGGCACTAAGTGTGTTCCTCTTTGCCTCTTTGAGCATGAA
CACAGACACACAAACACACACACAGTGCTGATATTTTTACTGCCATTTTA
CATGTCTTTCTATAATAACTAGATATACAAAGAAAAACTGTAGCCTTCAA
GGGCCAAAGTACATAAGAAATCAGTTTTTAATTTTTTAATTATTTATTTA
TTTTACATTCTGACTGACTGAAGTTTTGCCTCCCTCTTCTCCTCCCAAGC
CCTCCTCCAACAACTCCATTCTCTCCTTCCCCTAAACTCCCCCATCCACT
CCTACTGCCACAGACCCTCTGGGCCCCTTTGTCTGTGTGGAACGGGTCTC
TAGTCCCAGGTGGGCAAAGTGTTGGATGAGATGACAGACAGATGCACACA
GGAGAGGTTGTGTAGAATCTTTTGTCAAATCGAGCATCAAACGTTTTATA
CAGAAGAAAATAAGGAAGTTGGGTGACACACCCGCAAGGTACAAAGAAGT
TACTGGATTCTTACACAAAACAGAGGAATACAAACACAGAAGGTCTAACA
GGAACCACCTGGGATAGAATTCATTGTTAACAACTGGGATCAA

Query= MSMg01no270_i10.g1 MSMg01no270_i10.g1 CHROMAT_FILE:
MSMg01no270_i10.g1 PHD_FILE: MSMg01no270_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:12 2005
         (670 letters)



>mm_chr3_20542328_20543397
          Length = 1070

 Score = 1203 bits (622), Expect = 0.0
 Identities = 658/670 (98%), Gaps = 1/670 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgggtaccaacttaactgaaaatgaaaactgatgatttctttgacagttcctgtctca 60
           |||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||
Sbjct: 863 actgggtaccaacttaactgaaaatgaaaactgatgatttcagtgagagttcctgtctca 804

                                                                       
Query: 61  agggaataaacagagaataatacaaaaaggcactaagtgtgttcctctttgcctctttga 120
           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 803 agggaataaacagagaataatacaaaaagacactaagtgtgctcctctttgcctctttga 744

                                                                       
Query: 121 gcatgaacacagacacacaaacacacacacagtgctgatatttttactgccattttacat 180
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gcatggacacagacacacaaacacacacacagtgctgatatttttactgccattttacat 684

                                                                       
Query: 181 gtctttctataataactagatatacaaagaaaaactgtagccttcaagggccaaagtaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtctttctataataactagatatacaaagaaaaactgtagccttcaagggccaaagtaca 624

                                                                       
Query: 241 taagaaatcagtttttaattttttaattatttatttattttacattctgactgactgaag 300
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 taagaaatcagtttttaa-tttttaattatttatttattttacattctgactgactgaag 565

                                                                       
Query: 301 ttttgcctccctcttctcctcccaagccctcctccaacaactccattctctccttcccct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttttgcctccctcttctcctcccaagccctcctccaacaactccattctctccttcccct 505

                                                                       
Query: 361 aaactcccccatccactcctactgccacagaccctctgggcccctttgtctgtgtggaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaactcccccatccactcctactgccacagaccctctgggcccctttgtctgtgtggaac 445

                                                                       
Query: 421 gggtctctagtcccaggtgggcaaagtgttggatgagatgacagacagatgcacacagga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gggtctctagtcccaggtgggcaaagtgttggatgagatgacagacagatgcacacagga 385

                                                                       
Query: 481 gaggttgtgtagaatcttttgtcaaatcgagcatcaaacgttttatacagaagaaaataa 540
           |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 384 gaggttgtgtagaaacttttgtcaaatcgagcatcaaactttttatacagaagaaaataa 325

                                                                       
Query: 541 ggaagttgggtgacacacccgcaaggtacaaagaagttactggattcttacacaaaacag 600
           |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 ggaaattgggtaacacacccgcaaggtacaaagaggttactggattcttacacaaaacag 265

                                                                       
Query: 601 aggaatacaaacacagaaggtctaacaggaaccacctgggatagaattcattgttaacaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggaatacaaacacagaaggtctaacaggaaccacctgggatagaattcattgttaacaa 205

                     
Query: 661 ctgggatcaa 670
           ||||||||||
Sbjct: 204 ctgggatcaa 195


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)