Query= MSMg01no271_a17.b1 MSMg01no271_a17.b1 CHROMAT_FILE:
MSMg01no271_a17.b1 PHD_FILE: MSMg01no271_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:50 2005
(286 letters)
>mm_chr3_144249004_144249689
Length = 686
Score = 447 bits (231), Expect = e-130
Identities = 275/301 (91%), Gaps = 20/301 (6%)
Strand = Plus / Plus
Query: 1 gcacatagttaatttacaagt------atagaaggctatttggccactttgctaagcgat 54
|||| ||||||||||||| || |||||||||| |||||||||||||||||| |||
Sbjct: 195 gcacgtagttaatttacaggtatagaaatagaaggctgtttggccactttgctaagtgat 254
Query: 55 ttgctaaaatcgcagcccagcttctctcccttgatcctgtgtcaacagatgtggggtaca 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttgctaaaatcgcagcccagcttctctcccttgatcctgtgtcaacagatgtggggtaca 314
Query: 115 tattttcagtgtgttttgtggcataaatgtacaaccttaacaagtttctattgcattcaa 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tattttcagtgtgttttgtggcataaatgtacaaccttaacaagtttctattgcattcaa 374
Query: 175 gaatagtgcctttattatttgtccatgtatggctagcttattgttcagaattgtaaaaaa 234
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 375 gaatagtgcctttattatttgtccatgtatgactagcttattgttcagaattgcaaaaaa 434
Query: 235 aaaaaa---------gggggggtagaggggaatgttggaatgagcaatgaagtaaaatgt 285
|||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 435 aaaaaaaaaaaaaaaggg-----agaggggaatgttggaatgagcaatgaagtaaaatgt 489
Query: 286 a 286
|
Sbjct: 490 a 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no271_a17.g1 MSMg01no271_a17.g1 CHROMAT_FILE:
MSMg01no271_a17.g1 PHD_FILE: MSMg01no271_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:50 2005
(632 letters)
>mm_chr3_144481963_144482993
Length = 1031
Score = 557 bits (288), Expect = e-162
Identities = 327/344 (95%), Gaps = 9/344 (2%)
Strand = Plus / Minus
Query: 292 ttcttcttcttcttcttcttcttcttcttcttcttctgttgtttctggccccc----cct 347
|||||||||||||||||| ||||||||||||||||||||||||||||| | | |
Sbjct: 1031 ttcttcttcttcttcttcctcttcttcttcttcttctgttgtttctgg----cttttctt 976
Query: 348 tttaaaagggtctactccatgtgtaacacagcaatataaggccccatgccctgcttcaga 407
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 tttaaaagggtctactccatgtgtaacacagcaatataaggccccatgccctgcttcagg 916
Query: 408 agttattacatttaatcttcacaacatgcctttttaaagacctcattgacctcgttttga 467
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 915 agttattacatttaatcttcacaacattcctttttaaagacctcattgacctcgttttga 856
Query: 468 gtcaggaaaattgaggctgagagagaagttatactgagaaaaataatctcttgctaacaa 527
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 855 gtcagaaaaattgaggctgagagagaagttatactcagaaaaataatctcttgctaacaa 796
Query: 528 aagtatttaaaatctagtaagaagatgtgttatgttggtaagatgagcttaagcaacaag 587
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 aa-tatttaaaatctagtaagaagatgtgttatgttggtaagatgagcttaagcaacaag 737
Query: 588 acagagtaaaacagtgactcgggaaaggtaaaaaacattaagat 631
|||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 736 acagagtacaacagtgactcgggaaaggtaaaaaactttaagat 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space: 635062
Effective search space used: 635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
