Query= MSMg01no271_g14.b1 MSMg01no271_g14.b1 CHROMAT_FILE:
MSMg01no271_g14.b1 PHD_FILE: MSMg01no271_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:17 2005
(318 letters)
>mm_chr3_40660891_40661608
Length = 718
Score = 549 bits (284), Expect = e-161
Identities = 305/312 (97%), Gaps = 3/312 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttaacttgtactttattttgaaaattgcctgccagtgtgtgaattaaatcta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttaacttgtactttattttgaaaattgcctgccagtgtgtgaattaaatcta 264
Query: 65 ttattttccaactatactccagcatagaaggaaaacaaatatttatgaaagtgtctttaa 124
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 ttattttccaactatactccagcatagaaggaaaacaaatatttgtgaaagtgtctttaa 324
Query: 125 aaaggcacaatggggctggagagttggcttagtggttaagagcactgactgttcttccac 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaggcacaatggggctggagagttggcttagtggttaagagcactgactgttcttccag 384
Query: 185 aggtcctgagttcaatt-ccctgcaaccacatggtggctcacaaccatctataataggat 243
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggtcctgagttcaatttccc-gcaaccacatggtggctcacaaccatctataataggat 443
Query: 244 ctgataccctccctcttccggtgtgtctgaaaacaatgaaagtgtactctataataaaat 303
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 444 ctgataccctccctctcccggtgtgtctgaagacaatgaaagtgtactctataataaaat 503
Query: 304 aaatctt-aaaa 314
||||||| ||||
Sbjct: 504 aaatctttaaaa 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_g14.g1 MSMg01no271_g14.g1 CHROMAT_FILE:
MSMg01no271_g14.g1 PHD_FILE: MSMg01no271_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:17 2005
(287 letters)
>mm_chr3_40902999_40903685
Length = 687
Score = 528 bits (273), Expect = e-154
Identities = 283/287 (98%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 ccatgtgtattttggtctgagatttaatattctttatattgaagttaactactgatttaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 379 ccatgtgtattttggtctgagatttaatattctttatattgaagttaattactgatttaa 320
Query: 61 cctttacatctaataataaaaaaatgaatgtttgagttctaaaatttaccatctaccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cctttacatctaataataaaaaaatgaatgtttgagttctaaaatttaccatctaccatc 260
Query: 121 tgaatcagagttctctaaaccctcatccagaattctgtttttttaattcattattagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgaatcagagttctctaaaccctcatccagaattctgtttttttaattcattattagtgg 200
Query: 181 tgtgtgtgtgtgtgtgtgtgcgcagatacatgctcacatgaaggccaaagggcaactttg 240
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tgtgtgtgtgtgtgtgcg--cgcagatacatgctcacatgaaggccaaagggcaactttg 142
Query: 241 gggtttttgctcccaattccatagcatggtcttcagataccaaaact 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gggtttttgctcccaattccatagcatggtcttcagataccaaaact 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
