Query= MSMg01no271_n20.b1 MSMg01no271_n20.b1 CHROMAT_FILE:
MSMg01no271_n20.b1 PHD_FILE: MSMg01no271_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:50 2005
(318 letters)
>mm_chr3_127961272_127961988
Length = 717
Score = 495 bits (256), Expect = e-144
Identities = 303/328 (92%), Gaps = 17/328 (5%)
Strand = Plus / Plus
Query: 6 aattccatttcatctgtgaagataatgaggtaatgcaagttgaaggtaaatggatggaac 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aattccatttcatctgtgaagataatgaggtaatgcaagttgaaggtaaatggatggaac 251
Query: 66 tagaaactattacacagaattaagtatgtaggcccaaaaagacaaatggtgcatgctctc 125
|||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 252 tagaaaagattacacagggttaagtatgtagacccaaaaagacaaatggtgcatgctctc 311
Query: 126 tcttatttgtagagtccaga-tttttttttt--------------ttaagtacaggtaga 170
|||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 312 tcttatttgtagagtccagagttttttttttgttttttgttttttttaagtacaggtaga 371
Query: 171 tttttttttttccagaattgtaaagataggagtgagagactaagagttggacagctaacc 230
||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 372 ttttttttt--ccagaattgtaaagataggagtgggagactaagagttagacagctaacc 429
Query: 231 tggtgggcagacaaatagagaaaagggccacagctaggcaatgaaggagtcgaatttcca 290
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tggtgggcagacaaatagagagaagggccacagctaggcaatgaaggagtcgaatttcca 489
Query: 291 agatggctggcttattccttgtcctcct 318
||||||||||||||||||||||||||||
Sbjct: 490 agatggctggcttattccttgtcctcct 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_n20.g1 MSMg01no271_n20.g1 CHROMAT_FILE:
MSMg01no271_n20.g1 PHD_FILE: MSMg01no271_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:50 2005
(291 letters)
>mm_chr3_128125249_128125939
Length = 691
Score = 561 bits (290), Expect = e-164
Identities = 290/290 (100%)
Strand = Plus / Minus
Query: 1 attcaaaatgaaacttatttcaaaaggattatggccaagaaaatgattgctcttgggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 attcaaaatgaaacttatttcaaaaggattatggccaagaaaatgattgctcttgggtaa 431
Query: 61 aaatatatacacaaaaattaacaagaacatattgtttactttcttctagttcaagatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaatatatacacaaaaattaacaagaacatattgtttactttcttctagttcaagatccc 371
Query: 121 agacagaaataacagagatgggagtgcctcagaaagcacagactcgacataaagatactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agacagaaataacagagatgggagtgcctcagaaagcacagactcgacataaagatactg 311
Query: 181 aaggcattggaagataatgaagggattaatgcagattactgcagcaacacaattttttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aaggcattggaagataatgaagggattaatgcagattactgcagcaacacaattttttca 251
Query: 241 aaagtgctacagagaaaattttaatgtattgatagaccatgtttgaataa 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaagtgctacagagaaaattttaatgtattgatagaccatgtttgaataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|