Query= MSMg01no273_i16.b1 MSMg01no273_i16.b1 CHROMAT_FILE:
MSMg01no273_i16.b1 PHD_FILE: MSMg01no273_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:56 2005
(315 letters)
>mm_chr3_27315743_27316457
Length = 715
Score = 576 bits (298), Expect = e-169
Identities = 307/312 (98%), Gaps = 4/312 (1%)
Strand = Plus / Plus
Query: 4 ggaattctttacagcagcagtgctgaagtgttttgttttttttttaaaaaaaaaaagact 63
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 208 ggaattctttacagcagcagtgctgaagtgttttgtttttttttt----aaaaaaagact 263
Query: 64 cttcctgtgaatgaatagccttaaaaaccattccactgcatctgccttcacccgcctgtg 123
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctccctgtgaatgaatagccttaaaaaccattccactgcatctgccttcacccgcctgtg 323
Query: 124 actgccgcagggaatgcagaagtgacgtcacagtgggccaaaagacacacttcgatggaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actgccgcagggaatgcagaagtgacgtcacagtgggccaaaagacacacttcgatggaa 383
Query: 184 ggatgagcttccgaaggccagagctttggcaaaaatagatttaccttgataccatcagtg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggatgagcttccgaaggccagagctttggcaaaaatagatttaccttgataccatcagtg 443
Query: 244 tacacgtctaattacactaatcaccatagtcgataacaaaatacagaactctctagtgca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacacgtctaattacactaatcaccatagtcgataacaaaatacagaactctctagtgca 503
Query: 304 taactctatcaa 315
||||||||||||
Sbjct: 504 taactctatcaa 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_i16.g1 MSMg01no273_i16.g1 CHROMAT_FILE:
MSMg01no273_i16.g1 PHD_FILE: MSMg01no273_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:56 2005
(244 letters)
>mm_chr3_27462663_27463306
Length = 644
Score = 387 bits (200), Expect = e-112
Identities = 233/244 (95%)
Strand = Plus / Minus
Query: 1 ccctggcaaggcagactaaccgaatcagccaccaagtgagagaccatacccagtatgtaa 60
|||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||
Sbjct: 550 ccctggcaaggcagactagctgaatcagccaccaagtgagagaccatagtcagtatgtaa 491
Query: 61 ggtggagagtggttagcgagtacaactaatgacgggctctggtctcatgtgcatgtgccc 120
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gatggagagtggttagcaagtacaactaatgacgggctctggtctcatgtgcatgtgccc 431
Query: 121 acatagccatatgcatcacatgcacgcatctcccatataaagcagatggacagacggaca 180
||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 430 acatagccatatgcatcacatgcacgcgtcccccatgtaaagcagatggacagacggaca 371
Query: 181 ctccatgccctttcgatgcttttgtctcaggtatggttatcactcacaggggattgtaga 240
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 370 ctccatgccctttcgatgcttttgtctcgggtatggttatcactcacaagggattgtaga 311
Query: 241 tgga 244
||||
Sbjct: 310 tgga 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
