Query= MSMg01no274_h05.b1 MSMg01no274_h05.b1 CHROMAT_FILE:
MSMg01no274_h05.b1 PHD_FILE: MSMg01no274_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:59 2005
(480 letters)
>mm_chr3_17730745_17731624
Length = 880
Score = 692 bits (358), Expect = 0.0
Identities = 373/378 (98%)
Strand = Plus / Minus
Query: 1 acagctttccagtacatgaaaaactaatcatgtgtgaaaggtgatcttattacccagtgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 378 acagctttccagtacatgaaaaactaatcatgtgtgaaaggtgatcttattaacaagtgt 319
Query: 61 tattttaatttccagttaaactagaacatttcacaagtacagataagtcgatgaaccaat 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tattttaatttccagttaaattagaacatttcacaagtacagataagtcgatgaaccaat 259
Query: 121 attttcctaaagacgaaaacatgaagattcaaaacaattttagacttagaattgatccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 attttcctaaagacgaaaacatgaagattcaaaacaattttagacttagaattgatccct 199
Query: 181 aattttaaggaattccttttgatgggtttttggtacactctcaaagaatattgaaattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aattttaaggaattccttttgatgggtttttggtacactctcaaagaatattgaaattac 139
Query: 241 ctatagtgtctgttacaacatactgttgtttctactatacagtggggtaaggttggattt 300
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 138 ctatagtgtctgttacaacatactgttgtttctaatgtacagtggggtaaggttggattt 79
Query: 301 tcttcatatacttccacccaaactacatctcaaaacagatcaatgagggagacagacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tcttcatatacttccacccaaactacatctcaaaacagatcaatgagggagacagacatg 19
Query: 361 agcattctgctgtcttct 378
||||||||||||||||||
Sbjct: 18 agcattctgctgtcttct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_h05.g1 MSMg01no274_h05.g1 CHROMAT_FILE:
MSMg01no274_h05.g1 PHD_FILE: MSMg01no274_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:59 2005
(234 letters)
>mm_chr3_17591734_17592367
Length = 634
Score = 433 bits (224), Expect = e-126
Identities = 233/238 (97%), Gaps = 4/238 (1%)
Strand = Plus / Plus
Query: 1 gatcctgtaggaaaaaaaaaaaaa----ctgagtttgagaacaaatataagaatctttgc 56
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 197 gatcctgtaggaaaaaaaaaaaaaaaaactgagtttgagaacaaatataagaatctttgc 256
Query: 57 cagtcttttcatttgtgaatttaactcaatgaaagaaggtgtgccttgtaaaacaaagcc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cagtcttttcatttgtgaatttaactcaatgaaagaaggtgtgccttgtaaaacaaagcc 316
Query: 117 ctggtttcagaacctggcactaaaaagataaaattttcactaaagagagttgttgaaagc 176
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 317 ctggtttcagaacctggcactaaaaagataaaattttcgctaaagagagttgttgaaagc 376
Query: 177 aaaaagaaaataattaccatgatatattaaaggcaaaatatattttaaaagcacaaga 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaaaagaaaataattaccatgatatattaaaggcaaaatatattttaaaagcacaaga 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
