Query= MSMg01no274_i13.b1 MSMg01no274_i13.b1 CHROMAT_FILE:
MSMg01no274_i13.b1 PHD_FILE: MSMg01no274_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:05 2005
(656 letters)
>mm_chr3_6113576_6114631
Length = 1056
Score = 1230 bits (636), Expect = 0.0
Identities = 651/656 (99%)
Strand = Plus / Minus
Query: 1 ccctgttttgtttaaatcttttgccccaaagctactcaaatcccaaaacttaccgtagac 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 856 ccctgttttgtttaaatcttttgccccaaagctactcaattcccaaaacttacagtagac 797
Query: 61 aaatacacattgacttagaacaagaggaaaagtttcaaccaacaaggggaaatgtctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 aaatacacattgacttagaacaagaggaaaagtttcaaccaacaaggggaaatgtctctt 737
Query: 121 gcgcaacttgaattatcatctttactatttttgggtatgtactaaaacactcatttttca 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 736 gcgcaacttgaattatcatctttactatttttgggtatgtactaaaacattcatttttca 677
Query: 181 acgtgctaattaaatttccacaaatgcagtgagcctttaaccacattataaggagaaata 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aagtgctaattaaatttccacaaatgcagtgagcctttaaccacattataaggagaaata 617
Query: 241 ttatatgataaagtagttgtgatttaagaaacaaggatcctatttaggtatttctgtaca 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttatatgataaagtagtcgtgatttaagaaacaaggatcctatttaggtatttctgtaca 557
Query: 301 actttctaaaaacaataaaaattatttttctttcttattataggacctgaagtaataagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 actttctaaaaacaataaaaattatttttctttcttattataggacctgaagtaataagt 497
Query: 361 gaaatataatcctcattaatttccccccagctgtatataaatcaatagctgtagcatccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gaaatataatcctcattaatttccccccagctgtatataaatcaatagctgtagcatccc 437
Query: 421 aaaggaaatgcacactgcatggtcctgcaagttcctaatgaatgcaaatagaatgacctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aaaggaaatgcacactgcatggtcctgcaagttcctaatgaatgcaaatagaatgacctt 377
Query: 481 tttctgacaactatgaatactgtttcacaattttaccattaaaatcgctggtgtcagcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tttctgacaactatgaatactgtttcacaattttaccattaaaatcgctggtgtcagcaa 317
Query: 541 ttcattcagtaaataggtagcaaacaatagttgtaagtattcattacagtaaaagagact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttcattcagtaaataggtagcaaacaatagttgtaagtattcattacagtaaaagagact 257
Query: 601 gaagaatgtcagctaaagttttacaacttttaagcctgaggttttgctcatttcat 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gaagaatgtcagctaaagttttacaacttttaagcctgaggttttgctcatttcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_i13.g1 MSMg01no274_i13.g1 CHROMAT_FILE:
MSMg01no274_i13.g1 PHD_FILE: MSMg01no274_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:05 2005
(649 letters)
>mm_chr3_5956367_5957414
Length = 1048
Score = 1234 bits (638), Expect = 0.0
Identities = 647/650 (99%), Gaps = 3/650 (0%)
Strand = Plus / Plus
Query: 1 ctgggaagtttttctaaaagggaaaatttgcaactatatatttaaagatttctgtttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggaagtttttctaaaagggaaaatttgcaactatatatttaaagatttctgtttaaa 260
Query: 61 ataaactgtcatagattttttacattggcaaggcttatttattttttaaaaaaacatgct 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ataaactgtcatagattttttacattggcaaggcttatttattttt-aaaaaaacatgct 319
Query: 121 tacaaaacaatgatactcatgcaattattgttttttaaaattgcttaattagaaatggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tacaaaacaatgatactcatgcaattattgttttttaaaattgcttaattagaaatggtg 379
Query: 181 ttcaatacattagtgtttttctatatagtattttgatatcttttcataacatcacttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttcaatacattagtgtttttctatatagtattttgatatcttttcataacatcacttaat 439
Query: 241 aagtgaaattttctgtaaaatgttatcatttgctgtattcttatgtaagaaattttctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagtgaaattttctgtaaaatgttatcatttgctgtattcttatgtaagaaattttctcc 499
Query: 301 ttgtctggcatagaaactatatatctttttaatgatcccagatggttaatgagtactgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttgtctggcatagaaactatatatctttttaatgatcccagatggttaatgagtactgaa 559
Query: 361 acatttttgaaataatgcaaatgaactaactacagtgaatgatcatgtgtttaaatgtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acatttttgaaataatgcaaatgaactaactacagtgaatgatcatgtgtttaaatgtta 619
Query: 421 agtagaaagcatagagacacgagtgtgagaaacatacagacacacatgcgtgtattaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agtagaaagcatagagacacgagtgtgagaaacatacagacacacatgcgtgtattaacc 679
Query: 481 attcaatgtaaaacattacttatcaccaatgggttatcttctgacatcgcatc-gggata 539
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 680 attcaatgtaaaacattacttatcaccaatgggttatcttctgacatcgca-ctgggata 738
Query: 540 gcactatacagtaaataatgaattgtgggatgcagccaggcttgcagaaaataactattt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gcactatacagtaaataatgaattgtgggatgcagccaggcttgcagaaaataactattt 798
Query: 600 gagagatggtgcatgaacagaaagctgtaattttgacaggtggcaaggtg 649
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gagagatggtgcatgaacagaaagctgtaattttgacaggtggcaaggtg 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1048
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1038
Effective search space: 663282
Effective search space used: 663282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
