Query= MSMg01no274_i16.b1 MSMg01no274_i16.b1 CHROMAT_FILE:
MSMg01no274_i16.b1 PHD_FILE: MSMg01no274_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:06 2005
(175 letters)
>mm_chr3_146571310_146571888
Length = 579
Score = 246 bits (127), Expect = 7e-70
Identities = 154/165 (93%), Gaps = 4/165 (2%)
Strand = Plus / Minus
Query: 5 gaattcacaaatgccataactacttgtactagacatgaacaggactagaataatcaatgt 64
||||||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 310 gaattcacaaaggctataactacttgtagtagacatgcacaggactagaataatcaatgt 251
Query: 65 ctgaggtcccactcacctcactgat----ggagtaagtggctgctggagagagagagaga 120
||||||||| |||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 250 ctgaggtcctactcacctcacttattcagggagtaagtggctgctggagagagagagaga 191
Query: 121 gagagagagagagagagagagagagagagagagagagagagagag 165
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aagagagagagagagagagagagagagagagagagagagagagag 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 579
Length adjustment: 8
Effective length of query: 167
Effective length of database: 571
Effective search space: 95357
Effective search space used: 95357
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_i16.g1 MSMg01no274_i16.g1 CHROMAT_FILE:
MSMg01no274_i16.g1 PHD_FILE: MSMg01no274_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:06 2005
(281 letters)
>mm_chr3_146420436_146421117
Length = 682
Score = 513 bits (265), Expect = e-150
Identities = 277/281 (98%), Gaps = 1/281 (0%)
Strand = Plus / Plus
Query: 1 acttccaattgcagaaaagcatacagcttccttaccgggggagggctctcccatttcctc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 acttccaattgcagaaaagcatacagcttccttaccgggggagggttctcccatttcctc 260
Query: 61 agaaagtcttctttggctttggctagaaactctttcactggaaaaaagaaaagaaaatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaagtcttctttggctttggctagaaactctttcactggaaaaaagaaaagaaaatag 320
Query: 121 acagtgtctggtaagaatgcgtatattgcataaagaagacacatcccatgtggctatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagtgtctggtaagaatgcgtatattgcataaagaagacacatcccatgtggctatatg 380
Query: 181 aaacacagatatccttgtgtgagcaactgttgtaaggacacgtgcatccctcagtgtgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacacagatatccttgtgtgagcaactgttgtaaggacacgtgcatccctcagtgtgac 440
Query: 241 agctcatggg-ctactggtgtctccatttctaaaggcctca 280
||| || ||| ||||||||||||||||||||||||||||||
Sbjct: 441 agcccagggggctactggtgtctccatttctaaaggcctca 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 682
Length adjustment: 9
Effective length of query: 272
Effective length of database: 673
Effective search space: 183056
Effective search space used: 183056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
