Query= MSMg01no275_i15.b1 MSMg01no275_i15.b1 CHROMAT_FILE:
MSMg01no275_i15.b1 PHD_FILE: MSMg01no275_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:17 2005
(689 letters)
>mm_chr3_73287432_73288520
Length = 1089
Score = 1266 bits (655), Expect = 0.0
Identities = 678/687 (98%), Gaps = 4/687 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgaatc--ttctttgttctaaatagcaaagtatcaggcatatgtcccaaaaat 62
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgaatcaatt--ttgttctaaatagcaaagtatcaggcatatgtcccaaaaat 262
Query: 63 aaattggcttttaaaacttttagcaaaaagttctgtaagcatctatgaaaaggaacattt 122
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaattggcttttaaaaattttagcaaaaagttctgtaagcatctatgaaaaggaacattt 322
Query: 123 taattacagtgatattcatcaaagacaaaccaaactaatcactataaaatgcatcatata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 taattacagtgatattcatcaaagacaaaccaaactaatcactataaaatgcatcatata 382
Query: 183 gtatttataaaagtttaagcatcattttctcaggtgttaatattatacatatacataaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtatttataaaagtttaagcatcattttctcaggtgttaatattatacatatacataaaa 442
Query: 243 tgaaaagtaattatgaagatagctatttttatgtcatgagaatatgagcaataataaaac 302
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 443 tgaaaagtaattatgaagatagctgtttttatgtcatgagaatataagcaataataaaac 502
Query: 303 tttgagaagagatattaagatattaagtattaaaatatagaaagtcaagggttaaagttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tttgagaagagatattaagatattaagtattaaaatatagaaagtcaagggttaaagttt 562
Query: 363 cagaaaaatcttgtatcagattatacttcacatagggtggacaaatcaatgcctcacatt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cagaaaaatcttgtatcagattatacttcacatagggtggacaaatcaatgcctcacatt 622
Query: 423 tttctccttttgatgtttactgatttccactataaactgtaggctctgtcttcttctgaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tttctccttttgatgtttactgatttccactataaactgtaggctctgtcttcttctgaa 682
Query: 483 gtatcagcatggaacttgtgactttcaatgatattataagttgaattttgaacttacgtg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtatcagcatggaacttgtgactttcaatgatattataagttgaattttgaacttacgtg 742
Query: 543 tgctttcttcccctggaaaaaatataattatgacagatttttaaagtttatactccagtg 602
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgctttcttcccctgaaaaaaatataattatgacagatttttaaagtttatactccagtg 802
Query: 603 tttcagaatgtatcctcacttgaaaacagtgcctttataggtagaagaaaaatataagac 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tttcagaatgtatcctcacttgaaaacagtgcctttataggtagaagaaaaatataagac 862
Query: 663 tgaattcaaatttggtaggtagcttac 689
|||||||||||||||| ||||||||||
Sbjct: 863 tgaattcaaatttggtgggtagcttac 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_i15.g1 MSMg01no275_i15.g1 CHROMAT_FILE:
MSMg01no275_i15.g1 PHD_FILE: MSMg01no275_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:18 2005
(640 letters)
>mm_chr3_73426476_73427515
Length = 1040
Score = 1027 bits (531), Expect = 0.0
Identities = 596/623 (95%), Gaps = 10/623 (1%)
Strand = Plus / Minus
Query: 1 atttttatgtagaaaacacaattttaaatgaaaaccaacggtatggccgaaaagctaata 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 613 atttttatgtagaaaacacaattttaaatgaaaaccaacggtatggttgaaaagctaata 554
Query: 61 agaagacacagtattttatcaaataaatattaaatgtttctaattttattgttgaagctt 120
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 553 agaagacacagtattttgtcaaataaatattaaatgtttctaattttagtgttgaagctt 494
Query: 121 ttttacgttattttgtatttgaaaagtagtactgtcttcaagttttctcttccactgaag 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 493 ttttacgttattttgtatttgaaaagtagtactgtcttcaatttttctcttccactgaag 434
Query: 181 gagttcaagggttgccatgttaaacttactaatcaatgagttaatcaaaatgttttaccc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 433 gagttcaagggttgccatgttaaacttactaatcaatgagtcaatcaaaatgtcttacct 374
Query: 241 gccatttgtagatatgagtaaagaacctgacagggattctggaactaataggtactgaaa 300
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 373 gccatttgtagatatgagtaaagaacctgacagggattccggaactaagaggtactgaaa 314
Query: 301 acaatacttctggctgagctgtagacccagtgtagagagagctagtactagttgaatgag 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 313 acaatacttctggctgagctgtagacccagtgtagagagagctagtgctagttgaatgag 254
Query: 361 gatttgttctttttctctgcttcttttacaaatagaatatctgccaaaaaaaaaaaaaat 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 253 gatttgttctttttctctgcttcttttacaaatagagtatctgccaaaaaaaa------t 200
Query: 421 acaaagctggcaggcaagcaaagccaatctaagcacctgtgttgtaaaacccagcaacct 480
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 acaaagctggcaagcaagcaaagccaatctaagcacctgtgttgtaaaacccagcaaccg 140
Query: 481 taattgccatcagaaatccatctgtgcgactggtactcactgcatgtgagttgactcact 540
||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 139 taattgccatcagaagtccatctgtgcgactggtact----gcatgtgagttgactcact 84
Query: 541 taatgtggaatggaaaggaatatgccctagagaaggaagtagcaaagttagtacatcatt 600
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 83 taatgtggaatggaaaggaatctgcactagagaaggaagtagcaaagttagtacatcatt 24
Query: 601 tggattttgtaagttaaaagttt 623
|||||||||||||||||||||||
Sbjct: 23 tggattttgtaagttaaaagttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
