Query= MSMg01no276_b04.b1 MSMg01no276_b04.b1 CHROMAT_FILE:
MSMg01no276_b04.b1 PHD_FILE: MSMg01no276_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:56 2005
(330 letters)
>mm_chr3_129779051_129779779
Length = 729
Score = 530 bits (274), Expect = e-155
Identities = 289/294 (98%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 5 gaattctcctctgccctccaaggacactagacttgcagatggtgcagacaaaatgtctat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcctctgccctccaaggacactagacttgcagatggtgcagacaaaatgtctat 264
Query: 65 atacagaaatttgtgcgaaaaaaagaattaagaaacaattgttaaaaatatcaattcact 124
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acacagaaatttgtg-gaaaaaaagaattaagaaacaattgttaaaaatatcaattcact 323
Query: 125 tagagagaatatcatacatactacatttgtgaagtgcccatcgaggccagaagagggtct 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 tagagagaatatcatacatactacatttgtgaagtgcccatcaaggccagaagagggtct 383
Query: 185 tagatccccctggaactgcagttactctgtgagtgccatgcaggtctctgggaattgaac 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 tagatccccctggaactgcagttactctgtgagtgccatgcaggtgtctgggaattgaac 443
Query: 245 ctggttcctctactactctcaaccaccacagcatactcatgcatggaatgattc 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttggttcctctactactctcaaccaccacagcatactcatgcatggaatgattc 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 729
Length adjustment: 9
Effective length of query: 321
Effective length of database: 720
Effective search space: 231120
Effective search space used: 231120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_b04.g1 MSMg01no276_b04.g1 CHROMAT_FILE:
MSMg01no276_b04.g1 PHD_FILE: MSMg01no276_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:56 2005
(100 letters)
>mm_chr3_129918871_129919369
Length = 499
Score = 155 bits (80), Expect = 8e-43
Identities = 95/100 (95%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 1 ccacttcctgacccactctgatcaggtgcaaagtagaagaggtgaaaaatccattcttat 60
||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 299 ccacttcatgactcactctgatcaagtgcaaagtagaagaggtgaaaaatccattcttat 240
Query: 61 gtttaactgaagctccttattcaaaggaacacaaacattt 100
||||||||| |||||||||||||||||||||||| |||||
Sbjct: 239 gtttaactg-agctccttattcaaaggaacacaatcattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 100
Length of database: 499
Length adjustment: 8
Effective length of query: 92
Effective length of database: 491
Effective search space: 45172
Effective search space used: 45172
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
