Query= MSMg01no276_d22.b1 MSMg01no276_d22.b1 CHROMAT_FILE:
MSMg01no276_d22.b1 PHD_FILE: MSMg01no276_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:09 2005
(321 letters)
>mm_chr3_133791269_133791989
Length = 721
Score = 605 bits (313), Expect = e-178
Identities = 319/321 (99%)
Strand = Plus / Minus
Query: 1 caattaccatcaaattggattgaatattccaacagaccagcaggagtaagatttttaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 caattaccatcaaattggattgaatattccaacagaccagcaggagtaagatttttaaat 553
Query: 61 tttttaaatattttaaaattttctttaaaatgcagtattttattaaagtatatctgggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tttttaaatattttaaaattttctttaaaatgcagtattttattaaagtatatctgggtc 493
Query: 121 atgctactataaaaattaaaaagcccaacatcaaaagtggctgaagtaaatgacatatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atgctactataaaaattaaaaagcccaacatcaaaagtggctgaagtaaatgacatatta 433
Query: 181 acataatttgatgtgtagctattatcactcatattgtgaagccatgaatatcaaaactaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acataatttgatgtgtagctattatcactcatattgtgaagccatgaatatcaaaactaa 373
Query: 241 cacatttaaaaccccaggtatttgccagactttcttagaaggaaagtcactgattaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cacatttaaaaccccaggtatttgccagactttcttagaaggaaagtcactgattaactc 313
Query: 301 cagcttttcctaacttttttc 321
|| ||||||||||||||||||
Sbjct: 312 caacttttcctaacttttttc 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_d22.g1 MSMg01no276_d22.g1 CHROMAT_FILE:
MSMg01no276_d22.g1 PHD_FILE: MSMg01no276_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:09 2005
(307 letters)
>mm_chr3_133592939_133593644
Length = 706
Score = 555 bits (287), Expect = e-162
Identities = 302/307 (98%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 1 tacatgcattcctaaccactttggataaacccatgctggaatggatccttggaggaagga 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacatgcattcccaaccactttggataaacccatgctggaatggatccttggaggaagga 260
Query: 61 gctgctcgctctcagtacacattgactcttcacccagggcgggatcgcgtggaaagttct 120
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
Sbjct: 261 gctgctcgctctcagtacacattgactcttcaccca-ggtgggatcgcgtggaaagtttt 319
Query: 121 atgtccatgatgacatatcaactggtgttgccgtcactggagtcttgcttaggaccatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgtccatgatgacatatcaactggtgttgccgtcactggagtcttgcttaggaccatac 379
Query: 181 tgttagcatcccatgggtgcctcctgggtgcctttcattttccatagaccactatccagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgttagcatcccatgggtgcctcctgggtgcctttcattttccatagaccactatccagt 439
Query: 241 agcaggcatctgggccactggctcttacaatctttccaccaccttttgaagaattgttcc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 440 agcaggcatctgggccactggctcttacaatctttccaccaccttttgaagaattgtttc 499
Query: 301 ccgagcc 307
|||||||
Sbjct: 500 ccgagcc 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 706
Length adjustment: 9
Effective length of query: 298
Effective length of database: 697
Effective search space: 207706
Effective search space used: 207706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
