TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTCCCTCTTTCAGCATTGATCAATCACCAACATATCCTTAGGTA
GGCCTGGAACTTTTTCAACCACTCACCCTCCTTGATAGGATTTTGCCTGG
GTTGAGCACGCTGTCAAAATCAATGCAAATTGATATCTGTAACTGCCCCA
CTGTACCCAGAAAACACTGTTTCCTTGTAGTTACCTATAACTCTGGTTCT
TGCAAGATTTCCATCCTATCATCTACCATGATTCTTAAATCTTGATCTTT
TTATCCTGTTATTTTTCCTAGATATTAAGGCTGTAGGGTCACACCATTCT
TTACATATCTGTATGACTTCATGTATGGTTATGGTAATATTTGAAACAGA
TCTCCTAGGCTAATCTCTTAGTTATGATGGATTGCCATTCATGTAGTGGT
AAGGTTCCAATCCAAGACCTCATGAATAGTAGACATGTTCCCTATTCCTG
TGTTACATTTTCAGACTCTAATATAAATTTGTATTGTATCCGATATTCAA
TCCGAATCTCTTCTTCTTCTTCCTTTTTTTTTTCTCAAACAAAATATAGT
TCTGGATAAAGCTGTGTCAATGTGAGAAAGAAAAAACCAACAACAAAATA
GACATGGAAGGTGCAGTTCAGCCAAAGAAAGATAATTTTCTTCCTTCAAT
TTATATATATATATGAATGACCATATACTGACTGTTACTGATATTGAAGG
AAATT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTCTCCCAAACTCACATAAAAAG
CCCCTCGTGGTTGCTAGCACTTACACCCCAGCATTAGGGATGCAGAAACA
ATCAGGAAGAACCCCGGAACTACCTACAAGCAAGCCTAGTTAGTCTACAT
GGTAAGCGGCAGATCAATGAGATGGATGTGTTTCATAAAACCCAATGGCC
CCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTTGATAAAAT
CTTGCTAGTATATGCAATGGTGTCAGCGTTTGGATGCTGATTATGGATGC
TCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGA
GAAAGAACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTAGAACAAC
ACTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTA
TCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACA
CGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGG
GAGTGGGTGGGTAGGGGAGTGNNNNNNNNNNNNNTTNTNNNNNNTNNNCN
NNTNNTTTTNCCGGGNNTTCTTACCTGATGNNNATATTCNCCCTCTTACA
TTGCTCAAACCCAACCCCATAAAAGTTGAACTGCTTCCTCCTTTCTACA

Query= MSMg01no276_e06.b1 MSMg01no276_e06.b1 CHROMAT_FILE:
MSMg01no276_e06.b1 PHD_FILE: MSMg01no276_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:10 2005
         (707 letters)



>mm_chr3_70615311_70616424
          Length = 1114

 Score = 1255 bits (649), Expect = 0.0
 Identities = 684/699 (97%), Gaps = 7/699 (1%)
 Strand = Plus / Plus

                                                                       
Query: 16  ctctttcagcattgatcaatcaccaacatatccttaggtaggcctggaactttttcaacc 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ctctttcagcattgatcaatcaccaacatatccttaggtaggcctggaactttttcaacc 275

                                                                       
Query: 76  actcaccctccttgataggattttgcctgggttgagcacgctgtcaaaatcaatgcaaat 135
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 276 actcaccctccttgataggattttgcctgggttgagcatgctgtcaaaatcaatgcaaat 335

                                                                       
Query: 136 tgatatctgtaactgccccactgtacccagaaaacactgtttccttgtagttacctataa 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgatatctgtaactgccccactgtacccagaaaacactgtttccttgtagttacctataa 395

                                                                       
Query: 196 ctctggttcttgcaagatttccatcctatcatctaccatgattcttaaatcttgatcttt 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctctggttcttgcaagatttccatcctatcatctaccatgattcttaaatcttgatcttt 455

                                                                       
Query: 256 ttatcctgttatttttcctagatattaaggctgtagggtcacaccattctttacatatct 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttatcctgttatttttcctagatattaaggctgtagggtcacaccattctttacatatct 515

                                                                       
Query: 316 gtatgacttcatgtatggttatggtaatatttgaaacagatctcctaggctaatctctta 375
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gtgtgacttcatgtatggttatggtaatatttgaaacagatctcctaggctaatctctta 575

                                                                       
Query: 376 gttatgatggattgccattcatgtagtggtaaggttccaatccaagacctcatgaatagt 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gttatgatggattgccattcatgtagtggtaaggttccaatccaagacctcatgaatagt 635

                                                                       
Query: 436 agacatgttccctattcctgtgttacattttcagactctaatataaatttgtattgtatc 495
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 agacatgttccctattcctgtgttacattttcagactctaatataaatttgtattgtatc 695

                                                                       
Query: 496 cgatattcaatccgaatctcttcttcttcttcctttttttttt----ctcaaacaaaata 551
            ||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||
Sbjct: 696 tgatattcgatccgaatctcttcttcttcttccttttttttttttttctcaaacaaaata 755

                                                                       
Query: 552 tagttctggataaagctgtgtcaatgtgagaaagaaaaaaccaacaacaaaatagacatg 611
           ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 756 tagttctggataaagctgtgtcaatgtgagaaagaaaaatccaacaataaaatagacatg 815

                                                                       
Query: 612 gaaggtgcagttcagccaaagaaagataattttcttccttcaatttatatatatatatga 671
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gaaagtgcagttcagccaaagaaagataattttcttccttcaatttatatatatatatga 875

                                                  
Query: 672 ---atgaccatatactgactgttactgatattgaaggaa 707
              || |||||||||||||||||||||||||||||||||
Sbjct: 876 tgaataaccatatactgactgttactgatattgaaggaa 914


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 1114
Length adjustment: 10
Effective length of query: 697
Effective length of database: 1104
Effective search space:   769488
Effective search space used:   769488
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)