Query= MSMg01no276_h15.b1 MSMg01no276_h15.b1 CHROMAT_FILE:
MSMg01no276_h15.b1 PHD_FILE: MSMg01no276_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:25 2005
(320 letters)
>mm_chr3_32974380_32975097
Length = 718
Score = 569 bits (294), Expect = e-166
Identities = 307/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Plus
Query: 5 gaattccaagaaggcaccagggaaagtgtagcttgtgtgcctgagagacagactctggta 64
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 gaattccaagaaggcaccagggaaagtgtagcttgtgaccctgagagacagactctggta 264
Query: 65 ctttggaaccctcacaagcaaatggggtatgaattatgtataaattaagccaccatactg 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttggaaccctcagaagcaaatggggtatgaattatgtataaattaagccaccatactg 324
Query: 125 atatggccaagaaagtactgtccagatggcactgagtacaaaagacagtgacacacattc 184
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 atatggccaagaaagtactgtccagatggca--gagtacaaaagacagtgacacacattc 382
Query: 185 cctcgtcattttactatttatgagtccaaggcttgagtcagctggtggtaggacaggcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cctcgtcattttactatttatgagtccaaggcttgagtcagctggtggtaggacaggcta 442
Query: 245 tctgttagcatcacaagaaagctgggccttgctctttcatttttatttgatgctggcctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tctgttagcatcacaagaaagctgggccttgctctttcatttttatttgatgctggcctt 502
Query: 305 gatctccctgac 316
||||||||||||
Sbjct: 503 gatctccctgac 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 718
Length adjustment: 9
Effective length of query: 311
Effective length of database: 709
Effective search space: 220499
Effective search space used: 220499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_h15.g1 MSMg01no276_h15.g1 CHROMAT_FILE:
MSMg01no276_h15.g1 PHD_FILE: MSMg01no276_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:25 2005
(289 letters)
>mm_chr3_33158277_33158965
Length = 689
Score = 516 bits (267), Expect = e-151
Identities = 282/287 (98%)
Strand = Plus / Minus
Query: 1 ctgagttaaccaatacactaaggaagttttcttttaatgtgaccaaagccccagtagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 607 ctgagttaaccaatacactaaggaagttttcttttaatgtgaccaaagcatcagtagcaa 548
Query: 61 acagaaaaatgaatggactcaaggataggctatttgaaagtatacagttagaagagaaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 acagaaaaatgaatggactcaaggataggctatttgaaagtatacagttagaagagaaaa 488
Query: 121 ataaggtgataaatcttacaggaattttataatagtgctgaaagagcaaacatattcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ataaggtgataaatcttacaggaattttataatagtgctgaaagagcaaacatattcaaa 428
Query: 181 taaataatatctgggctggatgcataggtaagatgcttgctctataagcatgaagacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 taaataatatctgggctggatgcataggtaagatgcttgctctataagcatgaagacctg 368
Query: 241 aattgatatcccaagcttccatatataaagcctggaatggggacatg 287
|||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 367 aattgagatcccaagcttccatatataaagcctggaatgggggcatg 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
