Query= MSMg01no277_a20.b1 MSMg01no277_a20.b1 CHROMAT_FILE:
MSMg01no277_a20.b1 PHD_FILE: MSMg01no277_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:07 2005
(363 letters)
>mm_chr3_86376144_86376905
Length = 762
Score = 679 bits (351), Expect = 0.0
Identities = 360/363 (99%), Gaps = 1/363 (0%)
Strand = Plus / Plus
Query: 1 cactgttctatgacatcactttgaggcaggaaagtgatgttttcaagacatatagaccaa 60
||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 201 cactgttctatgacatcactttgaggcagtaaagtgatgttttcaagtc-tatagaccaa 259
Query: 61 ccagtagtcaaatttaaaaacaacttaactctcatttgtcctagagtgtttctagaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccagtagtcaaatttaaaaacaacttaactctcatttgtcctagagtgtttctagaatga 319
Query: 121 tgcttttccaagtatgatggtttgtggtaaggctaaatgtttaatgagtctatgttaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgcttttccaagtatgatggtttgtggtaaggctaaatgtttaatgagtctatgttaaag 379
Query: 181 gcagtacttatcttccaattaaccccaagatcacgctggcatttttgtaaatccacagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcagtacttatcttccaattaaccccaagatcacgctggcatttttgtaaatccacagaa 439
Query: 241 gtattttgagtgaggcctaaggggtgagctgcaggcagcctgtgaaaaatgtaaaaagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtattttgagtgaggcctaaggggtgagctgcaggcagcctgtgaaaaatgtaaaaagac 499
Query: 301 taacctgctaacaaaccctgtgcagagggacaaaggaagtttaatccgtattatagtaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taacctgctaacaaaccctgtgcagagggacaaaggaagtttaatccgtattatagtaaa 559
Query: 361 tgc 363
|||
Sbjct: 560 tgc 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 762
Length adjustment: 9
Effective length of query: 354
Effective length of database: 753
Effective search space: 266562
Effective search space used: 266562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_a20.g1 MSMg01no277_a20.g1 CHROMAT_FILE:
MSMg01no277_a20.g1 PHD_FILE: MSMg01no277_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:07 2005
(674 letters)
>mm_chr3_86519973_86521046
Length = 1074
Score = 816 bits (422), Expect = 0.0
Identities = 434/440 (98%), Gaps = 5/440 (1%)
Strand = Plus / Minus
Query: 239 ctcacagctatcagtaatgggatctgatgataccgtcttctgacatgcaggcatccatac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 ctcacagctatcagtaatgggatctgatgataccgtcttctgacatgcaggcatccatac 1015
Query: 299 acatatacataaactat----ataaataaatctttaaaaaaaacaaaacttacttccaca 354
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 1014 acatatacataaactatataaataaataaatcttt-aaaaaaacaaaacttacttccaca 956
Query: 355 tgtgtaagcacacatgttatgtggaggtcagagaaaagagtgtgagaattggttctctgc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 tgtgtaagcacacatgttatgtggaggtcagagaaaagagtgtgagaattggttctctgc 896
Query: 415 ttctaccatgtgagtttcaagctcagagtaaagcacccttgccctctgaacatactggct 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 ttctaccatgtgagtttcaagctcagagtaaagcacccttgccctctgaacatactggct 836
Query: 475 accgatttttgctgtgctattctgagaattaagttatgcagtgctcagtaagaatgcttg 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 accgatttttgctgtgctattctgagaattaagttatgcagtgctcagtaagaatgcttg 776
Query: 535 cattctgttttaacctcagtgtcatgtaggttcctatgatgctcggaaccatcatgtcca 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 cattctgttttaacctcagtgtcatgtaggttcctatgatgctcggaaccatcatgtcca 716
Query: 595 cagttctctagataaggtgctctggggtaacgttcacacacagaggcagagcatatgttt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 cagttctctagataaggtgctctggggtaacgttcacacacagaggcagagcatatgttt 656
Query: 655 accatgaggaagatcccggg 674
||| ||||||||||||||||
Sbjct: 655 accgtgaggaagatcccggg 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
