Query= MSMg01no277_e02.b1 MSMg01no277_e02.b1 CHROMAT_FILE:
MSMg01no277_e02.b1 PHD_FILE: MSMg01no277_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:21 2005
(601 letters)
>mm_chr3_118960949_118961948
Length = 1000
Score = 969 bits (501), Expect = 0.0
Identities = 579/621 (93%), Gaps = 26/621 (4%)
Strand = Plus / Minus
Query: 1 tgcttaaatataagccttttctatctggagggaagaacaccaataatactaataatacta 60
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||
Sbjct: 718 tgcttaaatataagccttttctatctggagggaaggacaccaataataataataataata 659
Query: 61 --------------------aataataataatacagcatgataaggaaccttaagtgata 100
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 658 ataataataataataataataataataataatacagaatgttaaggaaccttaagtgata 599
Query: 101 cagttcatagaaacatggtgtctagtatagtatgtagaaactaatattactgtcaatgca 160
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 598 cagttcatagaaatatggtgtctagtatagtatgtaaaaactaatattactgtcaatgca 539
Query: 161 agagaaaattcaacttaaagaaactattcatctatgaaaatatgaaaataaccacttaat 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agagaaaattcaacttaaagaaactattcatctatgaaaatatgaaaataaccacttaat 479
Query: 221 attaatggggttgattaagaacttttggggattttgtgccagtacaaggcccacaaaatt 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 attaatggggttgattaagaacttttggggattttgtgccagtacaaggcccacaaaatt 419
Query: 281 atgaatattcatagcttgattcttccatttaaacgtgaatcttgtgagtatctatttcaa 340
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 418 atgaatattcatagcttgattcttccattcaaatgtgaatcttgtgagtatctatttcaa 359
Query: 341 aagtaatttataatatctatatacatatgtcttttcatctacaacttacattttaagaag 400
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aagtaatttataatatctataaacatatgtcttttcatctacaacttacattttaagaag 299
Query: 401 tctatcacattggtatatgcatacaaagttaaaaatgcaaatgtgtctcccaaagtcgtc 460
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |
Sbjct: 298 tctatcacattggtatatgcatacaaagttaaatatgcaaacatgtctcccaaagtcacc 239
Query: 461 ttcttcctcctcctccttcttccccatcctcctctttctcctctttctcctcctcctcct 520
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 238 ttcttcctcctcctccttcttccccattctcctctttctcctctttctcctcctcctcct 179
Query: 521 ccttcttcctctctctctctctctctctcttttgttttttagcaaaccagcaaaaaataa 580
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ccttcttc------ctctctctctctctcttttgttttttagcaaaccagcaaaaaataa 125
Query: 581 ttaaatgctcatggagtgctg 601
|||||||||||||||||||||
Sbjct: 124 ttaaatgctcatggagtgctg 104
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1000
Length adjustment: 10
Effective length of query: 591
Effective length of database: 990
Effective search space: 585090
Effective search space used: 585090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_e02.g1 MSMg01no277_e02.g1 CHROMAT_FILE:
MSMg01no277_e02.g1 PHD_FILE: MSMg01no277_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:21 2005
(234 letters)
>mm_chr3_118828821_118829454
Length = 634
Score = 453 bits (234), Expect = e-132
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 aagttaaaacagttagttgcacacagtatgcacttgggcaatattggttgaacattaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagttaaaacagttagttgcacacagtatgcacttgggcaatattggttgaacattaagg 260
Query: 61 gaaaaagaacctttgtgtctcggttagcagctgccacagtgcaaggtcaatgtgtgttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaagaacctttgtgtctcggttagcagctgccacagtgcaaggtcaatgtgtgttag 320
Query: 121 aagcttgtttcatgttgtgagaacttcctaccagagagcttgtcataaaatacagggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcttgtttcatgttgtgagaacttcctaccagagagcttgtcataaaatacagggcag 380
Query: 181 ggccaaagtgcaaatattgtacagtggttggctgttatgtatcacctcgttcaa 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggccaaagtgcaaatattgtacagtggttggctgttatgtatcacctcgttcaa 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
