Query= MSMg01no277_o24.b1 MSMg01no277_o24.b1 CHROMAT_FILE:
MSMg01no277_o24.b1 PHD_FILE: MSMg01no277_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:09 2005
(290 letters)
>mm_chr3_47436841_47437530
Length = 690
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 agcaatgtagttagcaccctgttcgtagtgtcacacctttcctgtcatgacaaaaaatat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agcaatgtagttagcaccctgttcgtagtgtcacacctttcctgtcatgataaaaaatat 260
Query: 61 ggcttagaactctgaattaaagcaaacttgattttccttattcaagttgatttcaacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcttagaactctgaattaaagcaaacttgattttccttattcaagttgatttcaacagg 320
Query: 121 tattttgttagccacaagacaagtgacatattgtcaaaaatatcctgaacagtgtcaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttgttagccacaagacaagtgacatattgtcaaaaatatcctgaacagtgtcaggg 380
Query: 181 cccaagttactatatgactggtgagcagatgctgcctccatgctattatgtaagagatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaagttactatatgactggtgagcagatgctgcctccatgctattatgtaagagatgt 440
Query: 241 ggggagactattata-ttcgggactaaagcatttgctttcctatgctcc 288
|||||||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 441 ggggagactag-agaattcgggactaaagcatttgctttcctatgctcc 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_o24.g1 MSMg01no277_o24.g1 CHROMAT_FILE:
MSMg01no277_o24.g1 PHD_FILE: MSMg01no277_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:09 2005
(286 letters)
>mm_chr3_47582627_47583312
Length = 686
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%)
Strand = Plus / Minus
Query: 1 gactacagagaaaccctgtctcgaaaaataaatacctaaataaataaaataaataaaata 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 552 gactacagagaaaccctgtctcgaaaaataaataaataaataaataaaataaataaaata 493
Query: 61 aaataaggcgtagcaaatgcaattctggaaaggaaggttcttcaaatagggatatgcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaataaggcgtagcaaatgcaattctggaaaggaaggttcttcaaatagggatatgcaaa 433
Query: 121 atgctgtgactgaaacaggaattcagagactctgaggaagtctgttatcagtgagaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atgctgtgactgaaacaggaattcagagactctgaggaagtctgttatcagtgagaattt 373
Query: 181 gaaatgcatgtcctggtagactttattttgttttattattttgattgtattcagagctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaaatgcatgtcctggtagactttattttgttttattattttgattgtattcagagctgg 313
Query: 241 cgtaattcgtggtgtggtcagaaacacttctacaaaatcgcactat 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cgtaattcgtggtgtggtcagaaacacttctacaaaatcgcactat 267
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
