Query= MSMg01no289_c04.b1 MSMg01no289_c04.b1 CHROMAT_FILE:
MSMg01no289_c04.b1 PHD_FILE: MSMg01no289_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:23 2005
(244 letters)
>mm_chr3_117677586_117678229
Length = 644
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 acacacacacacacacacac-acaccacaccacacacgtacgcacatgtgaattcaaaac 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acacacacacacacacacaccacaccacaccacacacgtacgcacatgtgaattcaaaac 259
Query: 60 ctcacctttgagggattttaatatcgaaaacactagtatgggtgctttctaattatcact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctcacctttgagggattttaatatcgaaaacactagtatgggtgctttctaattatcact 319
Query: 120 taatgaataataaaaaaaccacttgtgctgggtctttaaaacaatcatttatgcttatat 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 320 taatgaataataaaaaaacctcttgtgctgggtctttaaaacaatcatttatgcttatat 379
Query: 180 tgatgatatccttaaaagctcagcttatatttttttcaacaaatgcagtaattccacatt 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 380 tgatgatatccttaaaagctcagcttatatttttttcagcaaatgcagtaattccacatt 439
Query: 240 ttaaa 244
|||||
Sbjct: 440 ttaaa 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no289_c04.g1 MSMg01no289_c04.g1 CHROMAT_FILE:
MSMg01no289_c04.g1 PHD_FILE: MSMg01no289_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:23 2005
(667 letters)
>mm_chr3_117864960_117866026
Length = 1067
Score = 971 bits (502), Expect = 0.0
Identities = 505/506 (99%)
Strand = Plus / Minus
Query: 1 tactgtggtttgtgaggaaccgtgaatttgaatttggagcactagctctttaatcctccc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 506 tactgtggtttgtgaggaaccgtgaatttgaatttggagcgctagctctttaatcctccc 447
Query: 61 tgccctctacgaagtacagcagcgatgagtgttatcgcatccattttctagaacgcactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgccctctacgaagtacagcagcgatgagtgttatcgcatccattttctagaacgcactt 387
Query: 121 caatgtgttgccattgaaaccatctctgcagaggtgacttgcaggcctttgcctgtcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 caatgtgttgccattgaaaccatctctgcagaggtgacttgcaggcctttgcctgtcctc 327
Query: 181 cgccatatgttgcttccctgatataaattgaagtgggaagagaacagagagatctggatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cgccatatgttgcttccctgatataaattgaagtgggaagagaacagagagatctggatc 267
Query: 241 ccagagcttgtttgcatgaaattaagcctcatttggtcctttaggcatttaaaatggatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ccagagcttgtttgcatgaaattaagcctcatttggtcctttaggcatttaaaatggatg 207
Query: 301 gcttaatttcttccttccttccttcctttcttctctcttttctttccatttctttccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gcttaatttcttccttccttccttcctttcttctctcttttctttccatttctttccttt 147
Query: 361 tccttttccttttcttccttcttgcagagtgtggacatacacatgagatagtttgaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tccttttccttttcttccttcttgcagagtgtggacatacacatgagatagtttgaaaaa 87
Query: 421 ctatttaaatactaaccatgtaactcattacataaagtttgtttttttaaaacgtttttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 ctatttaaatactaaccatgtaactcattacataaagtttgtttttttaaaacgtttttt 27
Query: 481 gatttagacatgcaaagtagtaggag 506
||||||||||||||||||||||||||
Sbjct: 26 gatttagacatgcaaagtagtaggag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
