Query= MSMg01no289_n03.b1 MSMg01no289_n03.b1 CHROMAT_FILE:
MSMg01no289_n03.b1 PHD_FILE: MSMg01no289_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:12 2005
(593 letters)
>mm_chr3_84918653_84919646
Length = 994
Score = 855 bits (442), Expect = 0.0
Identities = 478/490 (97%), Gaps = 1/490 (0%)
Strand = Plus / Minus
Query: 105 cttgagttagggctatagatgtacataatatgaagtcaccatttgtatcaggtcatggag 164
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 cttgagttagtgctatagatgtacataatatgaagtcaccatttgtatcaggtcatggag 935
Query: 165 gctacagggcagagtccatagccgttctgagccattgccttcagtgaaggtgttcacgat 224
|||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 934 gctacaaggcagagtccatagcccttctgagccactgccttcagtgaaggtgttcacggt 875
Query: 225 gacctctcctgtaaaatggggttatctgcctcctagggtgcctggccagatcaatgggga 284
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 874 gacctctcctgtaaaatggggctatctgcctcctagggtgcctggccagatcaatgggga 815
Query: 285 taatgtactggaaagcattttgacaaatacgaagtgcaattcaaatggattattgacagc 344
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 taatgtactggaaagcactttgacaaatacgaagtgcaattcaaatggattattgacagc 755
Query: 345 cctttgttaagtgttcgtttgattgccgaatggccttgaaagcaatgaagcatcatttct 404
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 754 cctttgttaagtgttcgtttgattgccgaatgtccttgaacgcaatgaagcatcatttct 695
Query: 405 tataaaccgttttataactcagacttttttttt-cttttgcaaattgtgaatgaccttcc 463
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 694 tataaaccgttttataactcagacttttttttttcttttgcaaattctgaatgaccttcc 635
Query: 464 ctccaatcagttcagctcttgtggttttcttctaaagcccagggagtcactgcatggaat 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ctccaatcagttcagctcttgtggttttcttctaaagcccagggagtcactgcatggaat 575
Query: 524 catgagtagtggaggaaaagctttccaagtcacctggtgtgcctccgccatccctgcatc 583
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 catgagaagtggaggaaaagctttccaagtcacctggtgtgcctccgccatccctgcatc 515
Query: 584 cccacagaca 593
||||||||||
Sbjct: 514 cccacagaca 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 994
Length adjustment: 10
Effective length of query: 583
Effective length of database: 984
Effective search space: 573672
Effective search space used: 573672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_n03.g1 MSMg01no289_n03.g1 CHROMAT_FILE:
MSMg01no289_n03.g1 PHD_FILE: MSMg01no289_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:12 2005
(353 letters)
>mm_chr3_84764294_84765046
Length = 753
Score = 609 bits (315), Expect = e-179
Identities = 338/347 (97%), Gaps = 5/347 (1%)
Strand = Plus / Plus
Query: 1 tttctaatattgatctgcaatagtgggggtattaatgctttcttctcatcacgctgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 tttctaatattgatctgcaatagtgggggtattaatgctttcttctcatgaggctgtttt 260
Query: 61 agagagccctttatacagtggttatttaataaaatttccaaatgttatacttgttacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagccctttatacagtggttatttaataaaatttccaaatgttatacttgttacagc 320
Query: 121 tcagctttagaaatgttaactataaaagtaaaatcagaacacccaactgtgagtctctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagctttagaaatgttaactataaaagtaaaatcagaacacccaactgtgagtctctaa 380
Query: 181 acccatttggtcctaaaaaagtatgtcttttatatgagtagttgcagtgagagatcattc 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acccatttggtcctagaaaagtatgtcttttatatgagtagttgcagtgagagatcattc 440
Query: 241 ttttattttatttattcactttacatcctgattgctgccccccc--agtctatccccacc 298
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 441 ttttattttatttattcactttacatcctgattgctgcccccccccagtctctccccacc 500
Query: 299 tccctccccttttcttctgagaaaatggagtgcttcccc-ccccccc 344
||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 501 tccctccccttttcttctgagaaaatggagtgc--cccctccccccc 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
