NNTTTCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGTGGTTATT
TGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTA
TTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGT
GGCCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTACAGAAGCTTTGCAA
TTTCATGAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTG
CTGTTCTATTAAGATTTTTTTTTGCCCTGTACCCATATCTTCGAGGCTTT
TCCCTGATTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTAGAGT
TCCTTAATCCACTTAGATTTGACCTTAGTACAAGGAGATAGAAATGGATC
AATTCGCATTCTTCTACATGATAACCACCAGTTGTGCCAGCATCATTTGT
TAAAAATGGTGTCTTTTTTCCACTGGATGGTTTTTGCTCCCTTGTCAAAG
ATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATT
CCATTGGTCTACTTTTCTGTCACTATACTAGCACCATGTAGTTTTTAATC
ACAATTGCCCTGTAGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAGA
GGTTCTTTTATCC

NCACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGACTTTTGGCTGTCAGGGAG
TTTTAAACATGTCTCAGGGTGACAGACTCATTTTACTTCCCCGTTTCAGC
CACCTTGACAGTTCAGCTAGGACAGAAAGCAAGCCAGGATTTAAATCCAT
CAGCATGGACGACTGGCACTTAACTTCCTTCTACTCTGAAGGAATAAAGA
AGAAAAACAGCAAGAAGATAACAGAACTATAGGGAAAGGAAGGAAGCAAG
GAAGCAGGCATTATGAAAATGATGTCATCAGCGCAATTCCGGTCCATCAG
AGGCTAGAGTGACTGCATACCACCAGATATAGCGCGCAGACTCTAAGCCC
CCAAAATAAGAAGCATAATAGGATGTTTTATATCTGACCTCAGACTTATG
ATAGAAAATGAAGAAAAGTGACTCAGAAAACTGGACAAGTCCCTTTGAAT
TTGGTTATTACTCCGAATGTGGCTGATCTTTTCTAAATTTGATTACCAAA
CTATCTACACTCTACCCCATATGCAAATGATGAGGAAAAGAGTTATGCCA
CTGATATAATACTGCCTACTATTATCATATGATCAAAACATAATGAATAC
AATTAAAAGCTACTATTTGACTTCATCGCCTTTCCGTAAACAAGAGAGTA
GGTGATAGTTAGTCA

Query= MSMg01no290_b17.g1 MSMg01no290_b17.g1 CHROMAT_FILE:
MSMg01no290_b17.g1 PHD_FILE: MSMg01no290_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:33 2005
         (623 letters)



>mm_chr3_128535204_128536227
          Length = 1024

 Score =  634 bits (328), Expect = 0.0
 Identities = 340/344 (98%), Gaps = 1/344 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgacttttggctgtcagggagttttaaacatgtctcagggtgacagactca-ttttact 59
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ttgacttttggctgtcagggagttttaaacatgtctcagggtgacagactcatttttact 260

                                                                       
Query: 60  tccccgtttcagccaccttgacagttcagctaggacagaaagcaagccaggatttaaatc 119
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccagtttcagccaccttgacagttcagctaggacagaaagcaagccaggatttaaatc 320

                                                                       
Query: 120 catcagcatggacgactggcacttaacttccttctactctgaaggaataaagaagaaaaa 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcagcatggacgactggcacttaacttccttctactctgaaggaataaagaagaaaaa 380

                                                                       
Query: 180 cagcaagaagataacagaactatagggaaaggaaggaagcaaggaagcaggcattatgaa 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcaagaagataacagaactatagggaaaggaaggaagcaaggaagcaggcattatgaa 440

                                                                       
Query: 240 aatgatgtcatcagcgcaattccggtccatcagaggctagagtgactgcataccaccaga 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgatgtcatcagcgcaattccggtccatcagaggctagagtgactgcataccaccaga 500

                                                       
Query: 300 tatagcgcgcagactctaagcccccaaaataagaagcataatag 343
           ||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatagtgtgcagactctaagcccccaaaataagaagcataatag 544



 Score =  267 bits (138), Expect = 2e-75
 Identities = 144/146 (98%), Gaps = 2/146 (1%)
 Strand = Plus / Plus

                                                                        
Query: 325  aaaataagaagcataataggatgttttatatctgacctcagacttatgatag-aaaatga 383
            |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 880  aaaa-aagaagcataataggatgttttatatctgacctcagacttatgatagaaaaatga 938

                                                                        
Query: 384  agaaaagtgactcagaaaactggacaagtccctttgaatttggttattactccgaatgtg 443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939  agaaaagtgactcagaaaactggacaagtccctttgaatttggttattactccgaatgtg 998

                                      
Query: 444  gctgatcttttctaaatttgattacc 469
            ||||||||||||||||||||||||||
Sbjct: 999  gctgatcttttctaaatttgattacc 1024


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 2
Length of query: 623
Length of database: 1024
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1014
Effective search space:   621582
Effective search space used:   621582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)