Query= MSMg01no292_c05.b1 MSMg01no292_c05.b1 CHROMAT_FILE:
MSMg01no292_c05.b1 PHD_FILE: MSMg01no292_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:07 2005
(328 letters)
>mm_chr3_13746481_13747208
Length = 728
Score = 611 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Minus
Query: 5 gaattcaattatcattcatctcttagtacacctctattcagatttaagttgccatcccat 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gaattcaattatcattcgtctcttagtacacctctattcagatttaagttgccatcccat 469
Query: 65 cattaagtttttctgttgacattttttcacccagaatattccatgtacttaatcttttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 cattaagtttttctgttgacattttttcacccagaatattccatgtacttaatcttttct 409
Query: 125 ttagcatttcctttattccttaattagcccacgacttgtagagaagtatcaaatatcctg 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 408 ttagcatttcctttattccttaattagcccgcgacttgtagagaagtatcaaatatcctg 349
Query: 185 agtgagtgcatgctgtctgttttacccttcaagcccttaagctaatttgtgagtgttttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agtgagtgcatgctgtctgttttacccttcaagcccttaagctaatttgtgagtgttttc 289
Query: 245 ctgaattatttagtagctttaatgtcaaacagaaaaccttttgatttataatttctttga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctgaattatttagtagctttaatgtcaaacagaaaaccttttgatttataatttctttga 229
Query: 305 ctaagaagttatcaattttgtata 328
||||||||||||||||||||||||
Sbjct: 228 ctaagaagttatcaattttgtata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_c05.g1 MSMg01no292_c05.g1 CHROMAT_FILE:
MSMg01no292_c05.g1 PHD_FILE: MSMg01no292_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:07 2005
(291 letters)
>mm_chr3_13585239_13585928
Length = 690
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 tgtagtgagttgccaattcaggaaaatctatttttctctccatatagtgttttgaaaaat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tgtagtgagttgccaattcaggaaaatctatttt-ctctccatatagtgttttgaaaaat 259
Query: 61 gtatatctatttgatagtttagaagtggtgacaactccatacagtgtagaaataactact 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 260 gtatatctatttgatagtttagaagtggtgacaactccatacagtgtagaaacaactact 319
Query: 121 aagaagtaggcagtacttggttcacagggatattttgtatctttaccaataatgctcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagaagtaggcagtacttggttcacagggatattttgtatctttaccaataatgctcttt 379
Query: 181 attcaactgaggtaatggaatgcatttcttatgagatggcttttcttatttttggcttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attcaactgaggtaatggaatgcatttcttatgagatggcttttcttatttttggcttca 439
Query: 241 gacaaatgacatagctactgctttggtaaaactttgaataatggtattctc 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gacaaatgacatagctactgctttggtaaaactttgaataatggtattctc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
